Index (Bigraph Parent Project 2.0.0-SNAPSHOT API)

A B C D E F G H I J K L M N O P R S T U V W X Z
All Classes and Interfaces|All Packages|Constant Field Values|Serialized Form

A

AbstractAgentMatchSupplier>> - Class in org.bigraphs.framework.simulation.modelchecking.reactions: Abstract base class for all agent match suppliers.
AbstractAgentMatchSupplier(Collection) - Constructor for class org.bigraphs.framework.simulation.modelchecking.reactions.AbstractAgentMatchSupplier
AbstractBigraphFactory<S extends AbstractEcoreSignature<? extends Control<? extends NamedType<?>,? extends FiniteOrdinal<?>>>> - Class in org.bigraphs.framework.core.factory: Abstract factory class for all kind of bigraphs.
AbstractBigraphFactory() - Constructor for class org.bigraphs.framework.core.factory.AbstractBigraphFactory
AbstractBigraphMatcher>> - Class in org.bigraphs.framework.simulation.matching: This class is responsible for executing bigraph matching.
AbstractBigraphMatcher() - Constructor for class org.bigraphs.framework.simulation.matching.AbstractBigraphMatcher
AbstractControl<NT extends NamedType<?>,V extends FiniteOrdinal<?>> - Class in org.bigraphs.framework.core: Abstract class representing a control of a signature.
AbstractControl(NT, V) - Constructor for class org.bigraphs.framework.core.AbstractControl
AbstractDynamicMatchAdapter<S extends AbstractEcoreSignature<? extends Control<?,?>>,B extends Bigraph<S> & EcoreBigraph<S>> - Class in org.bigraphs.framework.simulation.matching: An adapter for bigraphs used for the matching procedure.
AbstractDynamicMatchAdapter(B) - Constructor for class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter
AbstractDynamicMatchAdapter.ControlLinkPair - Class in org.bigraphs.framework.simulation.matching: Data structure to represent a pair
AbstractEcoreSignature<C extends Control<? extends NamedType,? extends FiniteOrdinal>> - Class in org.bigraphs.framework.core: Abstract class for Ecore-based signatures.
AbstractEcoreSignature() - Constructor for class org.bigraphs.framework.core.AbstractEcoreSignature
AbstractEcoreSignature(Set<C>) - Constructor for class org.bigraphs.framework.core.AbstractEcoreSignature
AbstractEcoreSignature(EObject) - Constructor for class org.bigraphs.framework.core.AbstractEcoreSignature
AbstractRankedGraph,N,E> - Class in org.bigraphs.framework.core: Abstract base class for a ranked graph representation for different classes of bigraphs.
AbstractRankedGraph(B) - Constructor for class org.bigraphs.framework.core.AbstractRankedGraph
AbstractRankedGraph.LabeledEdge - Class in org.bigraphs.framework.core
AbstractRankedGraph.LabeledNode - Class in org.bigraphs.framework.core: Represents the two types of nodes of a ranked graph: place nodes and link nodes.
AbstractReactionRule>> - Class in org.bigraphs.framework.core.reactivesystem: This base class represents an immutable data structure for all kinds of reaction rules.
AbstractReactionRule(B, B) - Constructor for class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
AbstractReactionRule(B, B, boolean) - Constructor for class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
AbstractReactionRule(B, B, InstantiationMap) - Constructor for class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
AbstractReactionRule(B, B, InstantiationMap, boolean) - Constructor for class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
AbstractReactionRule(ReactiveSystem, AbstractReactionRule) - Constructor for class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
AbstractReactionRule.ReactiveSystemBoundReactionRule>> - Class in org.bigraphs.framework.core.reactivesystem
AbstractReactionRuleSupplier>> - Class in org.bigraphs.framework.simulation.modelchecking.reactions: Abstract base class for all reaction rule suppliers.
AbstractReactionRuleSupplier(Collection<ReactionRule>) - Constructor for class org.bigraphs.framework.simulation.modelchecking.reactions.AbstractReactionRuleSupplier
AbstractSimpleReactiveSystem>> - Class in org.bigraphs.framework.core.reactivesystem: Abstract class of a "nice and simple" bigraphical reactive system (BRS).
AbstractSimpleReactiveSystem() - Constructor for class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem
AbstractSimpleReactiveSystem.TransitionSystemBoundSimpleReactiveSystem>> - Class in org.bigraphs.framework.core.reactivesystem: A bigraphical reactive system (BRS) bounded to a reaction graph.
AbstractTransitionSystem<B,T> - Class in org.bigraphs.framework.core.reactivesystem: Abstract base class representing the minimal data structure for all concrete transition system implementations.
AbstractTransitionSystem() - Constructor for class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem
AbstractTransitionSystem.Transition - Class in org.bigraphs.framework.core.reactivesystem: Inner class representing a transition relation.
acquireCanonicalForm() - Method in class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker
actionStack - Variable in class org.bigraphs.framework.converter.bigred.DefaultReactionRuleXMLLoader
ACTIVE - Enum constant in enum class org.bigraphs.framework.core.ControlStatus
addActiveKindSort(String, Collection<String>) - Method in class org.bigraphs.framework.core.impl.signature.KindSignatureBuilder: This methods adds a place-sort for the given control.
addAttribute(EClass, String, EDataType) - Static method in class org.bigraphs.framework.core.utils.emf.EMFUtils: Creates a default attribute with standard settings as in Eclipse (EMF)
addAttribute(EClass, String, EDataType, boolean, boolean, boolean, boolean, int, int) - Static method in class org.bigraphs.framework.core.utils.emf.EMFUtils
addAttribute(EClass, String, EDataType, boolean, int, int) - Static method in class org.bigraphs.framework.core.utils.emf.EMFUtils
addAttributeToElement(Element, String, String) - Method in class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder
addAttributeToNode(Element, String, String) - Method in class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder
addChild(String) - Method in interface org.bigraphs.framework.core.BigraphBuilder.NodeHierarchy
addChild(String) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy
addChild(String, String) - Method in interface org.bigraphs.framework.core.BigraphBuilder.NodeHierarchy: Creates a child node for the current node hierarchy with the given control label and connects it automatically to the given outer name.
addChild(String, String) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy
addChild(String, BigraphEntity.OuterName) - Method in interface org.bigraphs.framework.core.BigraphBuilder.NodeHierarchy
addChild(String, BigraphEntity.OuterName) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy
addChild(Control) - Method in interface org.bigraphs.framework.core.BigraphBuilder.NodeHierarchy
addChild(Control) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy
addChild(Control, String) - Method in interface org.bigraphs.framework.core.BigraphBuilder.NodeHierarchy
addChild(PureBigraphBuilder.Hierarchy) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy
addControl(String, int) - Method in class org.bigraphs.framework.core.impl.signature.DynamicSignatureBuilder
addControl(String, int) - Method in class org.bigraphs.framework.core.impl.signature.KindSignatureBuilder
addControl(String, int, ControlStatus) - Method in class org.bigraphs.framework.core.impl.signature.DynamicSignatureBuilder
addControl(Control<NT, FO>) - Method in class org.bigraphs.framework.core.SignatureBuilder
addDataAttributeToElement(Element, String, String) - Method in class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder
addEdge(B, String, B, String, BMatchResult, String) - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph
addEdge(B, String, B, String, BMatchResult, String) - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraphCollapsed
addEdge(String, String, String) - Method in class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder
addEdge(String, String, String, boolean) - Method in class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder: Add an edge to the graphML document.
addEndpointToHyperedge(Element, String, String) - Method in class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder
addHeader() - Method in class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder
addHyperedge() - Method in class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder
addInitialStateLabels(String...) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem
addInnerNameTo(BigraphEntity.InnerName, BigraphEntity.InnerName) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Connects the inner name toAttach to innerName via a link (i.e., an edge or outer name).
addInnerNameTo(BigraphEntity.InnerName, BigraphEntity.InnerName) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy: This method will attach the inner name toAttach to innerName while respecting a possibly existing link of innerName.
addKey(String, String, String) - Method in class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder
addLinkNames(String...) - Method in class org.bigraphs.framework.core.reactivesystem.TrackingMap
addNode(String, String) - Method in class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder
addNode(String, String, String) - Method in class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder: Add a node to the graphML document.
addNumber(int, float) - Method in class org.bigraphs.framework.core.utils.DistributedRandomNumberGenerator
addPassiveKindSort(String) - Method in class org.bigraphs.framework.core.impl.signature.KindSignatureBuilder: This method adds an empty place-sort for the given control.
addPlaceToList(List<BigraphEntity<?>>, EObject, boolean) - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter: Convenient method that finds the corresponding 'node type' (e.g., root) of a given EObject instance and adds it to the given list list.
addPortToNode(Element, String) - Method in class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder
addPredicate(ReactiveSystemPredicate) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem
addPredicateMatchToNode(ReactionGraph.LabeledNode, ReactiveSystemPredicate) - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph
addReactionRule(ReactionRule) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem
addReference(EClass, String, EClassifier, int, int) - Static method in class org.bigraphs.framework.core.utils.emf.EMFUtils
addSite() - Method in interface org.bigraphs.framework.core.BigraphBuilder.NodeHierarchy: Adds a site to the current parent.
addSite() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy
addState(String, B) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem
addSuperType(EClass, EClass) - Static method in class org.bigraphs.framework.core.utils.emf.EMFUtils
addSuperType(EClass, EPackage, String) - Static method in class org.bigraphs.framework.core.utils.emf.EMFUtils
addTransition(B, B, String, T) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem
adj(BigraphEntity.NodeEntity<?>, Bigraph<?>) - Method in class org.bigraphs.framework.simulation.matching.pure.IHSFilter
agent - Variable in class org.bigraphs.framework.simulation.matching.AbstractBigraphMatcher
AgentIsNullException - Exception in org.bigraphs.framework.core.exceptions
AgentIsNullException() - Constructor for exception org.bigraphs.framework.core.exceptions.AgentIsNullException
AgentNotGroundException - Exception in org.bigraphs.framework.core.exceptions
AgentNotGroundException() - Constructor for exception org.bigraphs.framework.core.exceptions.AgentNotGroundException
AgentNotPrimeException - Exception in org.bigraphs.framework.core.exceptions
AgentNotPrimeException() - Constructor for exception org.bigraphs.framework.core.exceptions.AgentNotPrimeException
agents - Variable in class org.bigraphs.framework.simulation.modelchecking.reactions.AbstractAgentMatchSupplier
allCandidatesFound() - Method in class org.bigraphs.framework.simulation.matching.pure.SubHypergraphIsoSearch
allowReducibleClasses() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.TransitionOptions: Flag that denotes whether to exploit the symmetries of the reaction graph or not.
allowReducibleClasses(boolean) - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.TransitionOptions.Builder: Flag to set whether to allow reducible classes for the reaction graph.
and(ModelCheckingOptions.Opts) - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions
AndPredicate>> - Class in org.bigraphs.framework.simulation.modelchecking.predicates: A composite predicate which concatenates all given predicates with the and operator.
AndPredicate(boolean, ReactiveSystemPredicate...) - Constructor for class org.bigraphs.framework.simulation.modelchecking.predicates.AndPredicate
AndPredicate(ReactiveSystemPredicate...) - Constructor for class org.bigraphs.framework.simulation.modelchecking.predicates.AndPredicate
AndPredicate(ReactiveSystemPredicate, ReactiveSystemPredicate) - Constructor for class org.bigraphs.framework.simulation.modelchecking.predicates.AndPredicate
AndPredicate(ReactiveSystemPredicate, ReactiveSystemPredicate, boolean) - Constructor for class org.bigraphs.framework.simulation.modelchecking.predicates.AndPredicate
apply() - Method in class org.bigraphs.framework.simulation.equivalence.adapter.BighuggiesBisimulationStringAdapter: "Applies" the adapter.
areConnected(BigraphEntity.NodeEntity<C>, BigraphEntity.NodeEntity<C>) - Method in interface org.bigraphs.framework.core.Bigraph: Check if two nodes are connected to each other.
areConnected(BigraphEntity.NodeEntity<C>, BigraphEntity.NodeEntity<C>) - Method in class org.bigraphs.framework.core.BigraphDelegator
areConnected(BigraphEntity.NodeEntity<C>, BigraphEntity.NodeEntity<C>) - Method in class org.bigraphs.framework.core.ElementaryBigraph
areConnected(BigraphEntity.NodeEntity<C>, BigraphEntity.NodeEntity<C>) - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
areConnected(BigraphEntity.NodeEntity<C>, BigraphEntity.NodeEntity<C>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
arity - Variable in class org.bigraphs.framework.core.AbstractControl
arity - Variable in class org.bigraphs.framework.core.ControlBuilder
arity(Integer) - Method in class org.bigraphs.framework.core.impl.signature.DynamicControlBuilder
arity(Integer) - Method in class org.bigraphs.framework.core.impl.signature.KindControlBuilder
arity(V) - Method in class org.bigraphs.framework.core.ControlBuilder
asBigraphOperator(Bigraph<DefaultDynamicSignature>) - Method in class org.bigraphs.framework.core.factory.PureBigraphFactory
asBigraphOperator(Bigraph<KindSignature>) - Method in class org.bigraphs.framework.core.factory.KindBigraphFactory
asBigraphOperator(Bigraph<S>) - Method in class org.bigraphs.framework.core.factory.AbstractBigraphFactory: Create a composition object for a given bigraph which allows to compose bigraphs.
assertAgentIsGround(B) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem
assertAgentIsPrime(B) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem
assertBigraphHasRoots(PureBigraph) - Method in class org.bigraphs.framework.simulation.encoding.BigraphCanonicalForm
assertDimensionsAreCorrect(int, int) - Method in class org.bigraphs.framework.core.alg.generators.BigridGenerator: Deprecated.

Checks some initial conditions before a bigrid can be created.
assertInstantiationMapIsWellDefined() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
assertInterfaceCompatibleForCompose(Bigraph<S>, Bigraph<S>, boolean) - Method in class org.bigraphs.framework.core.BigraphCompositeSupport
assertInterfaceCompatibleForJuxtaposition(Bigraph<S>, Bigraph<S>) - Method in class org.bigraphs.framework.core.BigraphCompositeSupport
assertIsProperParametricRule() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
assertNoIdleOuterName(ReactionRule) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem: Throws an InvalidReactionRuleException if an outer name of a given redex is idle (i.e., not connected to a point of the redex).
assertParametricRedexIsSimple(ReactionRule) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem: Checks if a parametric redex is simple.
assertReactionSystemValid() - Method in class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker: Performs some checks if the reactive system is valid.
assertRedexIsSimple() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
assertRuleLabelNotEmpty(String) - Method in class org.bigraphs.framework.core.reactivesystem.ReactionRuleComposer
assertSeparatorStringNotContainedInRuleLabel(String) - Method in class org.bigraphs.framework.core.reactivesystem.ReactionRuleComposer
assertSignaturesAreSame(Bigraph<S>, Bigraph<S>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphComposite
assertSortingIsEnsuredForControl(String) - Method in class org.bigraphs.framework.core.BigraphBuilderSupport
assertSortingIsEnsuredForControl(Control) - Method in class org.bigraphs.framework.core.BigraphBuilderSupport
assign() - Method in class org.bigraphs.framework.core.ControlBuilder
assign() - Method in class org.bigraphs.framework.core.impl.signature.DynamicControlBuilder
assign() - Method in class org.bigraphs.framework.core.impl.signature.KindControlBuilder
aSup - Variable in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem
ATOMIC - Enum constant in enum class org.bigraphs.framework.core.ControlStatus
attachToObject(AST) - Method in class org.bigraphs.framework.simulation.equivalence.StrongBisimulationMixinImpl
attachToObject(R) - Method in interface org.bigraphs.framework.simulation.equivalence.BehavioralEquivalenceMixin
ATTRIBUTE_ARITY - Static variable in interface org.bigraphs.framework.core.BigraphMetaModelConstants.SignaturePackage
ATTRIBUTE_INDEX - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
ATTRIBUTE_NAME - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
ATTRIBUTE_NAME - Static variable in interface org.bigraphs.framework.core.BigraphMetaModelConstants.SignaturePackage
ATTRIBUTE_STATUS - Static variable in interface org.bigraphs.framework.core.BigraphMetaModelConstants.SignaturePackage
availableEdges - Variable in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
availableEdges() - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
availableInnerNames - Variable in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
availableInnerNames() - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
availableNodes - Variable in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
availableNodes() - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
availableOuterNames - Variable in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
availableOuterNames() - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
availableRoots - Variable in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
availableRoots() - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
availableRules - Variable in class org.bigraphs.framework.simulation.modelchecking.reactions.AbstractReactionRuleSupplier
availableSites - Variable in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
availableSites() - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder

B

barren() - Method in class org.bigraphs.framework.core.impl.elementary.Placings
beginMatch() - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphMatchingEngine: Computes all matches
BehavioralEquivalenceMixin<R extends AbstractTransitionSystem<?,?>> - Interface in org.bigraphs.framework.simulation.equivalence: Mixin Infrastructure-related class.
BehavioralEquivalenceMixin.Algorithms - Enum Class in org.bigraphs.framework.simulation.equivalence
bfcs(B) - Method in class org.bigraphs.framework.simulation.encoding.BigraphCanonicalForm: Build a breadth-first canonical string (BFCS) for a pure bigraph according to the lexicographic order of the control's labels.
bfcs(ElementaryBigraph<?>) - Method in class org.bigraphs.framework.simulation.encoding.BigraphCanonicalForm
BFS - Enum constant in enum class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker.SimulationStrategy.Type
BighuggiesBisimulationProcessAdapter>,AST extends ReactionGraph> - Class in org.bigraphs.framework.simulation.equivalence.adapter: An adapter for AbstractTransitionSystem objects in Bigraph Framework for the external Java library "bighuggies:bisimulation" (shaded in the Simulation Module dependency).
BighuggiesBisimulationProcessAdapter(String, String, AST) - Constructor for class org.bigraphs.framework.simulation.equivalence.adapter.BighuggiesBisimulationProcessAdapter: This adapter takes three arguments: the AST to be adapted, and additionally a process name and prefix that the bighuggies Process class requires.
BighuggiesBisimulationStringAdapter<AST extends AbstractTransitionSystem<?,?>> - Class in org.bigraphs.framework.simulation.equivalence.adapter: An adapter for AbstractTransitionSystem objects in Bigraph Framework for the external Java library "bighuggies:bisimulation" (shaded in the Simulation Module dependency).
BighuggiesBisimulationStringAdapter(AST) - Constructor for class org.bigraphs.framework.simulation.equivalence.adapter.BighuggiesBisimulationStringAdapter
BigMcTransformator - Class in org.bigraphs.framework.converter.bigmc: Implementation of ReactiveSystemPrettyPrinter for the transformation of pure EMOF-based bigraphs to BigMC's term language.
BigMcTransformator() - Constructor for class org.bigraphs.framework.converter.bigmc.BigMcTransformator
bigraph - Variable in class org.bigraphs.framework.core.AbstractRankedGraph
Bigraph<S extends Signature<?>> - Interface in org.bigraphs.framework.core: Generic bigraph interface of all bigraph entities in this framework.
BIGRAPH_BASE_MODEL - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants: Relative path to the Ecore bigraph meta model inside the included bigraph model library.
BigraphAnalysis - Class in org.bigraphs.framework.core.analysis: Deprecated.
BigraphAnalysis() - Constructor for class org.bigraphs.framework.core.analysis.BigraphAnalysis: Deprecated.
BigraphBuilder<S extends Signature<?>> - Interface in org.bigraphs.framework.core: Common bigraph builder interface.
BigraphBuilder.NodeHierarchy<S extends Signature<? extends Control<?,?>>> - Interface in org.bigraphs.framework.core: A BigraphBuilder.NodeHierarchy contains a collection of nodes in a tree structure and is related to the current BigraphBuilder instance.
BigraphBuilderSupport<S extends Signature<? extends Control<?,?>>> - Class in org.bigraphs.framework.core: Supporting base class for concrete bigraph builder implementations.
BigraphBuilderSupport() - Constructor for class org.bigraphs.framework.core.BigraphBuilderSupport
BigraphBuilderSupport.InstanceParameter - Class in org.bigraphs.framework.core
BigraphCanonicalForm - Class in org.bigraphs.framework.simulation.encoding: This helper class creates a unique (canonical) label for a place graph of a bigraph such that two isomorphic place graphs have the same label.
BigraphCanonicalFormStrategy> - Class in org.bigraphs.framework.simulation.encoding
BigraphCanonicalFormStrategy(BigraphCanonicalForm) - Constructor for class org.bigraphs.framework.simulation.encoding.BigraphCanonicalFormStrategy
BigraphCanonicalFormSupport - Interface in org.bigraphs.framework.simulation.encoding
bigraphClassType - Variable in class org.bigraphs.framework.core.factory.AbstractBigraphFactory
BigraphComposite<S extends Signature<? extends Control<?,?>>> - Interface in org.bigraphs.framework.core: Common interface for the composition of bigraphs.
BigraphCompositeSupport<S extends AbstractEcoreSignature<? extends Control<?,?>>> - Class in org.bigraphs.framework.core: This class provides a collection of useful methods for implementations of BigraphComposite
BigraphCompositeSupport(Bigraph<S>) - Constructor for class org.bigraphs.framework.core.BigraphCompositeSupport
BigraphCompositeSupport.LinkComparator<T extends BigraphEntity<?>> - Class in org.bigraphs.framework.core
BigraphDecomposer>> - Class in org.bigraphs.framework.core.analysis: This class provides access to decomposition approaches to bigraphs.
BigraphDecomposer(BigraphDecompositionStrategy) - Constructor for class org.bigraphs.framework.core.analysis.BigraphDecomposer
BigraphDecompositionStrategy>> - Interface in org.bigraphs.framework.core.analysis: Strategy interface for concrete bigraph decomposition implementations.
BigraphDecompositionStrategy.DecompositionStrategy - Enum Class in org.bigraphs.framework.core.analysis
bigraphDelegate - Variable in class org.bigraphs.framework.core.BigraphDelegator
BigraphDelegator<S extends Signature<?>> - Class in org.bigraphs.framework.core: Delegator class for bigraphs (currently only suitable for pure bigraphs, e.g., no getParents() method available)
BigraphDelegator(Bigraph<S>) - Constructor for class org.bigraphs.framework.core.BigraphDelegator
BigraphEntity<C extends Control> - Class in org.bigraphs.framework.core.impl: Wrapper-like classes for the dynamic EMF model of bigraphs.
BigraphEntity.Edge - Class in org.bigraphs.framework.core.impl
BigraphEntity.InnerName - Class in org.bigraphs.framework.core.impl
BigraphEntity.Link - Class in org.bigraphs.framework.core.impl
BigraphEntity.NodeEntity<C extends Control> - Class in org.bigraphs.framework.core.impl
BigraphEntity.OuterName - Class in org.bigraphs.framework.core.impl
BigraphEntity.Port - Class in org.bigraphs.framework.core.impl
BigraphEntity.RootEntity - Class in org.bigraphs.framework.core.impl
BigraphEntity.SiteEntity - Class in org.bigraphs.framework.core.impl
BigraphEntityType - Enum Class in org.bigraphs.framework.core: Enums for all bigraph types.
BigrapherTransformator - Class in org.bigraphs.framework.converter.bigrapher: Implementation of ReactiveSystemPrettyPrinter for the transformation of pure EMOF-based bigraphs to bigraphER's specification language.
BigrapherTransformator() - Constructor for class org.bigraphs.framework.converter.bigrapher.BigrapherTransformator
BigraphFactory - Class in org.bigraphs.framework.core.factory: A bigraph factory class that provides a simplified main entry point for the developer/user to create arbitrary bigraphs and signatures.
BigraphFactory() - Constructor for class org.bigraphs.framework.core.factory.BigraphFactory
BigraphFactory.Registry - Interface in org.bigraphs.framework.core.factory: A map from signature to bigraphical EPackage (typed graph with signature extension).
BigraphFactoryElement - Interface in org.bigraphs.framework.core.factory
BigraphFileModelManagement - Class in org.bigraphs.framework.core: A simple file-based model management utility class that serializes (deserializes) to (from) XMI and Ecore: Serializes/Exports Ecore-based bigraph model objects (EObject and EPackage) to *.xmi and *.ecore Deserializes/Imports Ecore files (*.xmi and *.ecore) to Ecore-based bigraph model objects (EObject and EPackage)
BigraphFileModelManagement() - Constructor for class org.bigraphs.framework.core.BigraphFileModelManagement
BigraphFileModelManagement.Format - Enum Class in org.bigraphs.framework.core
BigraphFileModelManagement.Load - Class in org.bigraphs.framework.core
BigraphFileModelManagement.Store - Class in org.bigraphs.framework.core
BigraphGraphicsExporter<T> - Interface in org.bigraphs.framework.visualization: Minimal common interface for all graphics exporters
BigraphGraphvizExporter - Class in org.bigraphs.framework.visualization: This class visualizes a bigraph by means of GraphViz.
BigraphHashFunction>> - Interface in org.bigraphs.framework.simulation.encoding.hash: Base interface to implement hash functions for bigraphs.
bigraphInstanceModel(String) - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement.Load: Loads an instance model without validating it against its meta-model.
bigraphInstanceModel(String, String) - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement.Load: Loads an instance model and validates it against the given metamodel.
bigraphInstanceModel(EPackage, InputStream) - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement.Load: Loads an instance model and validates it against the given meta-model.
bigraphInstanceModel(EPackage, String) - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement.Load: Loads an instance model and validates it against the given metamodel.
BigraphIsNotGroundException - Exception in org.bigraphs.framework.core.exceptions
BigraphIsNotGroundException() - Constructor for exception org.bigraphs.framework.core.exceptions.BigraphIsNotGroundException
BigraphIsNotPrimeException - Exception in org.bigraphs.framework.core.exceptions
BigraphIsNotPrimeException() - Constructor for exception org.bigraphs.framework.core.exceptions.BigraphIsNotPrimeException
BigraphIsoPredicate>> - Class in org.bigraphs.framework.simulation.modelchecking.predicates: Predicate implementation that returns true if two bigraphs are isomorphic (i.e., structurally equivalent).
BigraphMatch>> - Interface in org.bigraphs.framework.core.reactivesystem: This interface represents a result of a bigraph matching and is used by the BigraphMatchingEngine in the simulation module.
BigraphMatchingEngine>> - Interface in org.bigraphs.framework.simulation.matching: Interface for implementing a matching algorithm for a concrete bigraph kind (e.g., pure bigraphs).
BigraphMatchingSupport - Class in org.bigraphs.framework.simulation.matching
BigraphMatchingSupport() - Constructor for class org.bigraphs.framework.simulation.matching.BigraphMatchingSupport
bigraphMetaModel(InputStream) - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement.Load: Loads the bigraph metamodel (*.ecore) by specifying an input stream.
bigraphMetaModel(InputStream, boolean) - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement.Load
bigraphMetaModel(String) - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement.Load: Loads the bigraph metamodel (*.ecore) by specifying a filename.
bigraphMetaModel(String, boolean) - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement.Load
BigraphMetaModelConstants - Class in org.bigraphs.framework.core: Some metamodel constants to conveniently refer to for the BigraphBaseMetaModel.
BigraphMetaModelConstants() - Constructor for class org.bigraphs.framework.core.BigraphMetaModelConstants
BigraphMetaModelConstants.SignaturePackage - Interface in org.bigraphs.framework.core
BigraphMetaModelLoadingFailedException - Exception in org.bigraphs.framework.core.exceptions
BigraphMetaModelLoadingFailedException(Exception) - Constructor for exception org.bigraphs.framework.core.exceptions.BigraphMetaModelLoadingFailedException
BigraphModelChecker>> - Class in org.bigraphs.framework.simulation.modelchecking: A bigraph model checker that allows to simulate a BRS by reaction rules.
BigraphModelChecker(ReactiveSystem, BigraphModelChecker.SimulationStrategy.Type, ModelCheckingOptions) - Constructor for class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker
BigraphModelChecker(ReactiveSystem, BigraphModelChecker.SimulationStrategy.Type, ModelCheckingOptions, BigraphModelChecker.ReactiveSystemListener) - Constructor for class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker
BigraphModelChecker(ReactiveSystem, ModelCheckingOptions) - Constructor for class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker
BigraphModelChecker.ReactiveSystemListener>> - Interface in org.bigraphs.framework.simulation.modelchecking
BigraphModelChecker.SimulationStrategy - Class in org.bigraphs.framework.simulation.modelchecking: Enum-like class that holds all kind of simulations.
BigraphModelChecker.SimulationStrategy.Type - Enum Class in org.bigraphs.framework.simulation.modelchecking
BigraphObjectDecoder,T> - Interface in org.bigraphs.framework.converter
BigraphObjectEncoder<T,B extends Bigraph<?>> - Interface in org.bigraphs.framework.converter
bigraphParsed - Variable in class org.bigraphs.framework.converter.bigred.DefaultReactionRuleXMLLoader
BigraphPrettyPrinter>> - Interface in org.bigraphs.framework.converter: A pretty printer interface for just bigraphs.
BigraphRankedGraphExporter - Class in org.bigraphs.framework.visualization: Exports a bigraph, encoded as a ranked graph, to a diagram.
BigraphRankedGraphExporter() - Constructor for class org.bigraphs.framework.visualization.BigraphRankedGraphExporter
BigraphSimulationException - Exception in org.bigraphs.framework.simulation.exceptions
BigraphSimulationException() - Constructor for exception org.bigraphs.framework.simulation.exceptions.BigraphSimulationException
BigraphSimulationException(String) - Constructor for exception org.bigraphs.framework.simulation.exceptions.BigraphSimulationException
BigraphUtil - Class in org.bigraphs.framework.core.utils: A collection of useful bigraph-related operations and queries.
BigraphUtil() - Constructor for class org.bigraphs.framework.core.utils.BigraphUtil
BigraphXmlLoaderSupport - Class in org.bigraphs.framework.converter.bigred: Support class for BigRed XML loader implementations.
BigraphXmlLoaderSupport() - Constructor for class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
BigraphXmlLoaderSupport.XmlProcessorCallback - Interface in org.bigraphs.framework.converter.bigred
BigRedXmlLoader - Interface in org.bigraphs.framework.converter.bigred
BigridGenerator - Class in org.bigraphs.framework.core.alg.generators: Deprecated.
BigridGenerator(DefaultDynamicSignature) - Constructor for class org.bigraphs.framework.core.alg.generators.BigridGenerator: Deprecated.

Default constructor for a bigrid.
BigridGenerator.DiscreteIons - Class in org.bigraphs.framework.core.alg.generators: Deprecated.

Inner class that provides the basic building blocks for constructing the bigrid.
BigridGenerator.DiscreteIons.NodeType - Enum Class in org.bigraphs.framework.core.alg.generators: Deprecated.
BindingControl<NT extends NamedType<?>,FO extends FiniteOrdinal<?>> - Class in org.bigraphs.framework.core.impl.signature: Note: This class is not yet implemented!
BindingControl(NT, FO) - Constructor for class org.bigraphs.framework.core.impl.signature.BindingControl
BindingSignature - Class in org.bigraphs.framework.core.impl.signature: Note: This class is not yet implemented!
BindingSignature(Set<BindingControl<? extends NamedType, ? extends FiniteOrdinal>>) - Constructor for class org.bigraphs.framework.core.impl.signature.BindingSignature
BisimulationCheckerSupport>,AST extends ReactionGraph> - Class in org.bigraphs.framework.simulation.equivalence: This implementation provides a basic extensible (template) method for computing bisimilarity of LTSs.
BisimulationCheckerSupport() - Constructor for class org.bigraphs.framework.simulation.equivalence.BisimulationCheckerSupport
BMatchResult>> - Interface in org.bigraphs.framework.core.reactivesystem: Generic interface for bigraph rewriting matching results.
BModelValidationResult<T> - Interface in org.bigraphs.framework.core.validation
BOTTOM_EDGE - Enum constant in enum class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons.NodeType: Deprecated.
BOTTOM_LEFT - Enum constant in enum class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons.NodeType: Deprecated.
BOTTOM_RIGHT - Enum constant in enum class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons.NodeType: Deprecated.
bottomEdge() - Method in class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons: Deprecated.
bottomLeft() - Method in class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons: Deprecated.
bottomRight() - Method in class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons: Deprecated.
BreadthFirstSimulationStrategy>> - Class in org.bigraphs.framework.simulation.modelchecking: Deprecated.
BreadthFirstSimulationStrategy(BigraphModelChecker) - Constructor for class org.bigraphs.framework.simulation.modelchecking.BreadthFirstSimulationStrategy: Deprecated.
BreadthFirstStrategy>> - Class in org.bigraphs.framework.simulation.modelchecking: The algorithm implemented here to synthesize the "reaction graph" is adopted from [1].
BreadthFirstStrategy(BigraphModelChecker) - Constructor for class org.bigraphs.framework.simulation.modelchecking.BreadthFirstStrategy
build() - Method in class org.bigraphs.framework.core.ControlBuilder
build() - Method in class org.bigraphs.framework.core.impl.signature.DynamicControlBuilder
build() - Method in class org.bigraphs.framework.core.impl.signature.KindControlBuilder
buildEmptySimpleDirectedGraph() - Static method in class org.bigraphs.framework.simulation.matching.BigraphMatchingSupport: Helper function to create a directed graph.
builder - Variable in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
builder - Variable in class org.bigraphs.framework.converter.bigred.DefaultReactionRuleXMLLoader
builder() - Static method in class org.bigraphs.framework.core.datatypes.EMetaModelData
Builder() - Constructor for class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions.Builder
Builder() - Constructor for class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.TransitionOptions.Builder
buildGroundReaction(B, BigraphMatch, ReactionRule) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem
buildGroundReaction(B, BigraphMatch, ReactionRule) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem.TransitionSystemBoundSimpleReactiveSystem
buildGroundReaction(B, BigraphMatch, ReactionRule) - Method in interface org.bigraphs.framework.core.reactivesystem.ReactiveSystem
buildGroundReaction(PureBigraph, BigraphMatch<PureBigraph>, ReactionRule<PureBigraph>) - Method in class org.bigraphs.framework.simulation.matching.pure.PureReactiveSystem
buildParametricReaction(B, BigraphMatch, ReactionRule) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem
buildParametricReaction(B, BigraphMatch, ReactionRule) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem.TransitionSystemBoundSimpleReactiveSystem
buildParametricReaction(B, BigraphMatch, ReactionRule) - Method in interface org.bigraphs.framework.core.reactivesystem.ReactiveSystem
buildParametricReaction(PureBigraph, BigraphMatch<PureBigraph>, ReactionRule<PureBigraph>) - Method in class org.bigraphs.framework.simulation.matching.pure.PureReactiveSystem
bxl - Variable in class org.bigraphs.framework.converter.bigred.DefaultReactionRuleXMLLoader

C

canonicalForm - Variable in class org.bigraphs.framework.core.reactivesystem.ReactionGraph.LabeledNode
canonicalForm - Variable in class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker
CanonicalLabeledNode(String, String) - Constructor for class org.bigraphs.framework.core.reactivesystem.ReactionGraph.CanonicalLabeledNode
canonicalNodeLabel - Variable in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem
canReverse - Variable in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
center() - Method in class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons: Deprecated.
CENTER - Enum constant in enum class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons.NodeType: Deprecated.
changeLabel(String) - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph.LabeledNode
checkAll(B) - Method in class org.bigraphs.framework.simulation.modelchecking.predicates.PredicateChecker: Checks all predicates passed via the constructor before.
checkBisimulation_Bighuggies(AST, AST) - Method in class org.bigraphs.framework.simulation.equivalence.BisimulationCheckerSupport: Bisimilarity checking using the KANELLAKIS_SMOLKA algorithm from the external "bighuggies:bisimulation" Java library.
checkIfNodeIsConnectable(BigraphEntity.NodeEntity<Control>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Checks whether a node's ports can be connected to a link (i.e., an edge or an outer name which in turn also includes inner names).
CLASS_BIGRAPH - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
CLASS_EDGE - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
CLASS_ESTRING2EJAVAOBJECT_MAP - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
CLASS_INDEXABLETYPE - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
CLASS_INNERNAME - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
CLASS_LINK - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
CLASS_NAMEABLETYPE - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
CLASS_NODE - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
CLASS_OUTERNAME - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
CLASS_PLACE - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
CLASS_POINT - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
CLASS_PORT - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
CLASS_ROOT - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
CLASS_SITE - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
clearCache() - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter
clearCache() - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphAgentAdapter
clearCache() - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphRedexAdapter
clearIntermediateResults() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Clears all generated intermediate results of the bigraph's current construction inside the builder.
clone() - Method in class org.bigraphs.framework.core.EcoreBigraph.Stub: This methods returns a copy of the actual bigraph.
clone() - Method in class org.bigraphs.framework.core.AbstractRankedGraph.LabeledEdge
close() - Method in class GCF.DefaultImpl2.GXLStandardAPI: Method to close the current GXL-construct.
close() - Method in class GCF.DefaultImpl3.GXLStandardAPI: Method to close the current GXL-construct.
close() - Method in class GCF.original.GXLStandardAPI: Method to close the current GXL-construct.
close() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl
close() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLBagAPIImpl
close() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLEdgeAPIImpl
close() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLGraphAPIImpl
close() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLGXLAPIImpl
close() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLNodeAPIImpl
close() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLRelAPIImpl
close() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLRelendAPIImpl
close() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLSeqAPIImpl
close() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLSetAPIImpl
close() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardAPI: Method to close the current GXL-construct.
close() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLTupAPIImpl
closeAllInnerNames() - Method in interface org.bigraphs.framework.core.BigraphBuilder
closeAllInnerNames() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Closes all inner names and doesn't keep idle edges and idle inner names.
closeAllOuterNames() - Method in interface org.bigraphs.framework.core.BigraphBuilder
closeAllOuterNames() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Closes all outer names.
closeAttr() - Method in class GCF.DefaultImpl2.GXLAttributedAPI: Method to close a child-element of type attr (see GXL-DTD).
closeAttr() - Method in class GCF.DefaultImpl3.GXLAttributedAPI: Method to close a child-element of type attr (see GXL-DTD).
closeAttr() - Method in class GCF.original.GXLAttributedAPI: Method to close a child-element of type attr (see GXL-DTD).
closeAttr() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttributedAPI: Method to close a child-element of type attr (see GXL-DTD).
closeBag() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to close a child-element of type bag (see GXL-DTD).
closeBag() - Method in interface GCF.DefaultImpl2.GXLStandardValueMethods
closeBag() - Method in class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type bag (see GXL-DTD).
closeBag() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type bag (see GXL-DTD).
closeBag() - Method in interface GCF.DefaultImpl3.GXLStandardValueMethods
closeBag() - Method in class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type bag (see GXL-DTD).
closeBag() - Method in class GCF.original.GXLAttrAPIImpl: Method to close a child-element of type bag (see GXL-DTD).
closeBag() - Method in interface GCF.original.GXLStandardValueMethods
closeBag() - Method in class GCF.original.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type bag (see GXL-DTD).
closeBag() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Method to close a child-element of type bag (see GXL-DTD).
closeBag() - Method in interface org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardValueMethods
closeBag() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type bag (see GXL-DTD).
closeBool() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to close child-element of type bool (see GXL-DTD).
closeBool() - Method in interface GCF.DefaultImpl2.GXLStandardValueMethods
closeBool() - Method in class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Method to close child-element of type bool (see GXL-DTD).
closeBool() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type bool (see GXL-DTD).
closeBool() - Method in interface GCF.DefaultImpl3.GXLStandardValueMethods
closeBool() - Method in class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Method to close child-element of type bool (see GXL-DTD).
closeBool() - Method in class GCF.original.GXLAttrAPIImpl: Method to close child-element of type bool (see GXL-DTD).
closeBool() - Method in interface GCF.original.GXLStandardValueMethods
closeBool() - Method in class GCF.original.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type bool (see GXL-DTD).
closeBool() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Method to close child-element of type bool (see GXL-DTD).
closeBool() - Method in interface org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardValueMethods
closeBool() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Method to close child-element of type bool (see GXL-DTD).
closeEdge() - Method in class GCF.DefaultImpl2.GXLGraphAPIImpl: Method to close a child-element of type edge (see GXL-DTD).
closeEdge() - Method in class GCF.DefaultImpl3.GXLGraphAPIImpl: Method to close a child-element of type edge (see GXL-DTD).
closeEdge() - Method in class GCF.original.GXLGraphAPIImpl: Method to close a child-element of type edge (see GXL-DTD).
closeEdge() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLGraphAPIImpl: Method to close a child-element of type edge (see GXL-DTD).
closeEnum() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to close a child-element of type enum (see GXL-DTD).
closeEnum() - Method in interface GCF.DefaultImpl2.GXLStandardValueMethods
closeEnum() - Method in class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type enum (see GXL-DTD).
closeEnum() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type enum (see GXL-DTD).
closeEnum() - Method in interface GCF.DefaultImpl3.GXLStandardValueMethods
closeEnum() - Method in class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type enum (see GXL-DTD).
closeEnum() - Method in class GCF.original.GXLAttrAPIImpl: Method to close a child-element of type enum (see GXL-DTD).
closeEnum() - Method in interface GCF.original.GXLStandardValueMethods
closeEnum() - Method in class GCF.original.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type enum (see GXL-DTD).
closeEnum() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Method to close a child-element of type enum (see GXL-DTD).
closeEnum() - Method in interface org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardValueMethods
closeEnum() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type enum (see GXL-DTD).
closeFloat() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to close a child-element of type float (see GXL-DTD).
closeFloat() - Method in interface GCF.DefaultImpl2.GXLStandardValueMethods
closeFloat() - Method in class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type float (see GXL-DTD).
closeFloat() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type float (see GXL-DTD).
closeFloat() - Method in interface GCF.DefaultImpl3.GXLStandardValueMethods
closeFloat() - Method in class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type float (see GXL-DTD).
closeFloat() - Method in class GCF.original.GXLAttrAPIImpl: Method to close a child-element of type float (see GXL-DTD).
closeFloat() - Method in interface GCF.original.GXLStandardValueMethods
closeFloat() - Method in class GCF.original.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type float (see GXL-DTD).
closeFloat() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Method to close a child-element of type float (see GXL-DTD).
closeFloat() - Method in interface org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardValueMethods
closeFloat() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type float (see GXL-DTD).
closeGraph() - Method in class GCF.DefaultImpl2.GXLGraphContainerAPI: Method to close a child-element of type graph (see GXL-DTD).
closeGraph() - Method in class GCF.DefaultImpl2.GXLGXLAPIImpl: Method to close a child-element of type graph (see GXL-DTD).
closeGraph() - Method in class GCF.DefaultImpl3.GXLGraphContainerAPI: Method to close a child-element of type graph (see GXL-DTD).
closeGraph() - Method in class GCF.DefaultImpl3.GXLGXLAPIImpl: Method to close a child-element of type graph (see GXL-DTD).
closeGraph() - Method in class GCF.original.GXLGraphContainerAPI: Method to close a child-element of type graph (see GXL-DTD).
closeGraph() - Method in class GCF.original.GXLGXLAPIImpl: Method to close a child-element of type graph (see GXL-DTD).
closeGraph() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLGraphContainerAPI: Method to close a child-element of type graph (see GXL-DTD).
closeGraph() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLGXLAPIImpl: Method to close a child-element of type graph (see GXL-DTD).
closeInnerName(String, boolean) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Convenient method for PureBigraphBuilder.closeInnerName(BigraphEntity.InnerName, boolean)
closeInnerName(BigraphEntity.InnerName) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Convenient method for PureBigraphBuilder.closeInnerName(BigraphEntity.InnerName, boolean).
closeInnerName(BigraphEntity.InnerName, boolean) - Method in class org.bigraphs.framework.core.BigraphBuilderSupport
closeInnerName(BigraphEntity.InnerName, boolean) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
closeInnerNames(BigraphEntity.InnerName...) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
closeInt() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to close a child-element of type int (see GXL-DTD).
closeInt() - Method in interface GCF.DefaultImpl2.GXLStandardValueMethods
closeInt() - Method in class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type int (see GXL-DTD).
closeInt() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type int (see GXL-DTD).
closeInt() - Method in interface GCF.DefaultImpl3.GXLStandardValueMethods
closeInt() - Method in class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type int (see GXL-DTD).
closeInt() - Method in class GCF.original.GXLAttrAPIImpl: Method to close a child-element of type int (see GXL-DTD).
closeInt() - Method in interface GCF.original.GXLStandardValueMethods
closeInt() - Method in class GCF.original.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type int (see GXL-DTD).
closeInt() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Method to close a child-element of type int (see GXL-DTD).
closeInt() - Method in interface org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardValueMethods
closeInt() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type int (see GXL-DTD).
closeLocator() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to close a child-element of type locator (see GXL-DTD).
closeLocator() - Method in interface GCF.DefaultImpl2.GXLStandardValueMethods
closeLocator() - Method in class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type locator (see GXL-DTD).
closeLocator() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type locator (see GXL-DTD).
closeLocator() - Method in interface GCF.DefaultImpl3.GXLStandardValueMethods
closeLocator() - Method in class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type locator (see GXL-DTD).
closeLocator() - Method in class GCF.original.GXLAttrAPIImpl: Method to close a child-element of type locator (see GXL-DTD).
closeLocator() - Method in interface GCF.original.GXLStandardValueMethods
closeLocator() - Method in class GCF.original.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type locator (see GXL-DTD).
closeLocator() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Method to close a child-element of type locator (see GXL-DTD).
closeLocator() - Method in interface org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardValueMethods
closeLocator() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type locator (see GXL-DTD).
closeNode() - Method in class GCF.DefaultImpl2.GXLGraphAPIImpl: Method to close a child-element of type node (see GXL-DTD).
closeNode() - Method in class GCF.DefaultImpl3.GXLGraphAPIImpl: Method to close a child-element of type node (see GXL-DTD).
closeNode() - Method in class GCF.original.GXLGraphAPIImpl: Method to close a child-element of type node (see GXL-DTD).
closeNode() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLGraphAPIImpl: Method to close a child-element of type node (see GXL-DTD).
closeOuterName(String, boolean) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Convenient method for PureBigraphBuilder.closeOuterName(BigraphEntity.OuterName, boolean)
closeOuterName(BigraphEntity.OuterName) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Closes the outer name by removing all connections and the outer name itself.
closeOuterName(BigraphEntity.OuterName, boolean) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: If an inner name is connected to an outer name, the inner name will remain (i.e., not be removed).
closeOutputFile() - Static method in class GCF.DefaultImpl2.GXLOutputAPI: Closes the OutputFile.
closeOutputFile() - Static method in class GCF.DefaultImpl3.GXLOutputAPI: Closes the OutputFile.
closeOutputFile() - Static method in class GCF.original.GXLOutputAPI: Closes the OutputFile.
closeOutputFile() - Static method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLOutputAPI: Closes the OutputFile.
closeRel() - Method in class GCF.DefaultImpl2.GXLGraphAPIImpl: Method to close a child-element of type rel (see GXL-DTD).
closeRel() - Method in class GCF.DefaultImpl3.GXLGraphAPIImpl: Method to close a child-element of type rel (see GXL-DTD).
closeRel() - Method in class GCF.original.GXLGraphAPIImpl: Method to close a child-element of type rel (see GXL-DTD).
closeRel() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLGraphAPIImpl: Method to close a child-element of type rel (see GXL-DTD).
closeRelend() - Method in class GCF.DefaultImpl2.GXLRelAPIImpl: Method to close a child-element of type relend (see GXL-DTD).
closeRelend() - Method in class GCF.DefaultImpl3.GXLRelAPIImpl: Method to close a child-element of type relend (see GXL-DTD).
closeRelend() - Method in class GCF.original.GXLRelAPIImpl: Method to close a child-element of type relend (see GXL-DTD).
closeRelend() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLRelAPIImpl: Method to close a child-element of type relend (see GXL-DTD).
closeSeq() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to close a child-element of type seq (see GXL-DTD).
closeSeq() - Method in interface GCF.DefaultImpl2.GXLStandardValueMethods
closeSeq() - Method in class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type seq (see GXL-DTD).
closeSeq() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type seq (see GXL-DTD).
closeSeq() - Method in interface GCF.DefaultImpl3.GXLStandardValueMethods
closeSeq() - Method in class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type seq (see GXL-DTD).
closeSeq() - Method in class GCF.original.GXLAttrAPIImpl: Method to close a child-element of type seq (see GXL-DTD).
closeSeq() - Method in interface GCF.original.GXLStandardValueMethods
closeSeq() - Method in class GCF.original.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type seq (see GXL-DTD).
closeSeq() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Method to close a child-element of type seq (see GXL-DTD).
closeSeq() - Method in interface org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardValueMethods
closeSeq() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type seq (see GXL-DTD).
closeSet() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to close a child-element of type set (see GXL-DTD).
closeSet() - Method in interface GCF.DefaultImpl2.GXLStandardValueMethods
closeSet() - Method in class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type set (see GXL-DTD).
closeSet() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type set (see GXL-DTD).
closeSet() - Method in interface GCF.DefaultImpl3.GXLStandardValueMethods
closeSet() - Method in class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type set (see GXL-DTD).
closeSet() - Method in class GCF.original.GXLAttrAPIImpl: Method to close a child-element of type set (see GXL-DTD).
closeSet() - Method in interface GCF.original.GXLStandardValueMethods
closeSet() - Method in class GCF.original.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type set (see GXL-DTD).
closeSet() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Method to close a child-element of type set (see GXL-DTD).
closeSet() - Method in interface org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardValueMethods
closeSet() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type set (see GXL-DTD).
closeString() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to close a child-element of type string (see GXL-DTD).
closeString() - Method in interface GCF.DefaultImpl2.GXLStandardValueMethods
closeString() - Method in class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type string (see GXL-DTD).
closeString() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type string (see GXL-DTD).
closeString() - Method in interface GCF.DefaultImpl3.GXLStandardValueMethods
closeString() - Method in class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type string (see GXL-DTD).
closeString() - Method in class GCF.original.GXLAttrAPIImpl: Method to close a child-element of type string (see GXL-DTD).
closeString() - Method in interface GCF.original.GXLStandardValueMethods
closeString() - Method in class GCF.original.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type string (see GXL-DTD).
closeString() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Method to close a child-element of type string (see GXL-DTD).
closeString() - Method in interface org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardValueMethods
closeString() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type string (see GXL-DTD).
closeTup() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to close a child-element of type tup (see GXL-DTD).
closeTup() - Method in interface GCF.DefaultImpl2.GXLStandardValueMethods
closeTup() - Method in class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type tup (see GXL-DTD).
closeTup() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type tup (see GXL-DTD).
closeTup() - Method in interface GCF.DefaultImpl3.GXLStandardValueMethods
closeTup() - Method in class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type tup (see GXL-DTD).
closeTup() - Method in class GCF.original.GXLAttrAPIImpl: Method to close a child-element of type tup (see GXL-DTD).
closeTup() - Method in interface GCF.original.GXLStandardValueMethods
closeTup() - Method in class GCF.original.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type tup (see GXL-DTD).
closeTup() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Method to close a child-element of type tup (see GXL-DTD).
closeTup() - Method in interface org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardValueMethods
closeTup() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Method to close a child-element of type tup (see GXL-DTD).
closeType() - Method in class GCF.DefaultImpl2.GXLTypedAndAttributedAPI: Method to close a child-element of type type (see GXL-DTD).
closeType() - Method in class GCF.DefaultImpl3.GXLTypedAndAttributedAPI: Method to close a child-element of type type (see GXL-DTD).
closeType() - Method in class GCF.original.GXLTypedAndAttributedAPI: Method to close a child-element of type type (see GXL-DTD).
closeType() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLTypedAndAttributedAPI: Method to close a child-element of type type (see GXL-DTD).
closure(String) - Method in class org.bigraphs.framework.core.impl.elementary.Linkings
closure(Set<NamedType<?>>) - Method in class org.bigraphs.framework.core.impl.elementary.Linkings
closure(NamedType<?>) - Method in class org.bigraphs.framework.core.impl.elementary.Linkings
coDomainSize() - Method in class org.bigraphs.framework.core.reactivesystem.InstantiationMap
CollapsedLabeledEdge(String, List<ReactionGraph.LabeledEdge>) - Constructor for class org.bigraphs.framework.core.reactivesystem.ReactionGraph.CollapsedLabeledEdge
CollapsedLabeledNode(String, String, List<ReactionGraph.LabeledNode>) - Constructor for class org.bigraphs.framework.core.reactivesystem.ReactionGraph.CollapsedLabeledNode
CollapsedLabeledNode(String, String, ReactionGraph.LabeledNode...) - Constructor for class org.bigraphs.framework.core.reactivesystem.ReactionGraph.CollapsedLabeledNode
collapseNodes(String, ReactionGraph.LabeledNode...) - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph
compare(T, T) - Method in class org.bigraphs.framework.core.BigraphCompositeSupport.LinkComparator
compareTo(FiniteOrdinal<T>) - Method in class org.bigraphs.framework.core.datatypes.FiniteOrdinal
compareTo(BigraphEntity.NodeEntity<C>) - Method in class org.bigraphs.framework.core.impl.BigraphEntity.NodeEntity
compareTo(BigraphEntity.Port) - Method in class org.bigraphs.framework.core.impl.BigraphEntity.Port
compareTo(BigraphEntity.RootEntity) - Method in class org.bigraphs.framework.core.impl.BigraphEntity.RootEntity
compareTo(BigraphEntity.SiteEntity) - Method in class org.bigraphs.framework.core.impl.BigraphEntity.SiteEntity
compose(Bigraph<S>) - Method in interface org.bigraphs.framework.core.BigraphComposite: Composes two bigraphs where a new immutable bigraph is created.
compose(Bigraph<S>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphComposite
compose(BigraphComposite<S>) - Method in interface org.bigraphs.framework.core.BigraphComposite: Composes two bigraphs where a new immutable bigraph is created.
compose(BigraphComposite<S>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphComposite
composeSignatures(List<DefaultDynamicSignature>) - Static method in class org.bigraphs.framework.core.utils.BigraphUtil
composeSignatures(DefaultDynamicSignature, DefaultDynamicSignature) - Static method in class org.bigraphs.framework.core.utils.BigraphUtil: This method composes the two given signatures left and right.
compute(B) - Method in class org.bigraphs.framework.simulation.encoding.BigraphCanonicalFormStrategy
compute(PureBigraph) - Method in class org.bigraphs.framework.simulation.encoding.PureCanonicalForm
computeRanks() - Method in class org.bigraphs.framework.simulation.matching.pure.SubHypergraphIsoSearch
condition1(BigraphEntity.NodeEntity<?>, BigraphEntity.NodeEntity<?>) - Method in class org.bigraphs.framework.simulation.matching.pure.IHSFilter: Degree and label
condition2(BigraphEntity.NodeEntity<?>, BigraphEntity.NodeEntity<?>) - Method in class org.bigraphs.framework.simulation.matching.pure.IHSFilter: The number of adjacent nodes
condition3(BigraphEntity.NodeEntity<?>, BigraphEntity.NodeEntity<?>) - Method in class org.bigraphs.framework.simulation.matching.pure.IHSFilter: Arity containment of hyperedges
condition4(BigraphEntity.NodeEntity<?>, BigraphEntity.NodeEntity<?>) - Method in class org.bigraphs.framework.simulation.matching.pure.IHSFilter: Label matchings of hyperedges
ConditionalParametricRuleDecorator>> - Class in org.bigraphs.framework.core.reactivesystem
ConditionalParametricRuleDecorator(ParametricReactionRule) - Constructor for class org.bigraphs.framework.core.reactivesystem.ConditionalParametricRuleDecorator
ConditionalParametricRuleDecorator(ParametricReactionRule, ConditionalParametricRuleDecorator.RuleConditionMatcher) - Constructor for class org.bigraphs.framework.core.reactivesystem.ConditionalParametricRuleDecorator
ConditionalParametricRuleDecorator.RuleConditionMatcher>> - Interface in org.bigraphs.framework.core.reactivesystem
conditionIsSatisfied(B, ReactionRule, BigraphMatch) - Method in interface org.bigraphs.framework.core.reactivesystem.ConditionalParametricRuleDecorator.RuleConditionMatcher
connectByEdge(String...) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy
connectByEdge(Control...) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy: Creates new child nodes and connects them with an edge
connectByEdge(BigraphEntity.NodeEntity<Control>...) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
connectByEdge(PureBigraphBuilder.Hierarchy...) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy
connectInnerNames(BigraphEntity.InnerName, BigraphEntity.InnerName) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Convenient method of PureBigraphBuilder.connectInnerNames(BigraphEntity.InnerName, BigraphEntity.InnerName, boolean) which doesn't keep idle edges when inner names are already connected to a node.
connectInnerNames(BigraphEntity.InnerName, BigraphEntity.InnerName, boolean) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Connects two existing inner names by an edge.
connectInnerNamesToNode(BigraphEntity.InnerName...) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy
connectInnerToLink(BigraphEntity.InnerName, BigraphEntity.Link) - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
connectInnerToLink(BigraphEntity.InnerName, BigraphEntity.Link) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
connectInnerToOuter(BigraphEntity.InnerName, BigraphEntity.OuterName) - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
connectInnerToOuterName(BigraphEntity, BigraphEntity) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Connects an inner name to an outer name.
connectInnerToOuterName0(BigraphEntity, BigraphEntity) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Ecore specific - only called by methods of this builder internally
connectNodesToInnerName(BigraphEntity.InnerName, Control...) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy: Creates new nodes with the given controls and connects them to the inner name of the current bigraph.
Controls must not be atomic.
connectNodeToInnerName(BigraphEntity.InnerName, Control) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy: Creates a new node with the given control and connects them to the inner name of the current bigraph.
connectNodeToInnerName(BigraphEntity.NodeEntity<Control>, BigraphEntity.InnerName) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Link a node with an inner name by an edge
connectNodeToInnerNames(BigraphEntity.NodeEntity<Control>, BigraphEntity.InnerName...) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Link multiple inner names by an edge to one node
connectNodeToOuterName(BigraphEntity.NodeEntity<Control>, BigraphEntity.OuterName) - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
connectNodeToOuterName(BigraphEntity.NodeEntity<Control>, BigraphEntity.OuterName) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Helper method to connect a node to an outer name.
connectNodeToOuterName2(BigraphEntity.NodeEntity<Control>, BigraphEntity.OuterName) - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder: Performs no checking at all, only if the node is already connected to the given outer name.
connectToEdge(BigraphEntity.NodeEntity<Control>, BigraphEntity.Edge) - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
connectToEdge(BigraphEntity.NodeEntity<Control>, BigraphEntity.Edge) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: no checks are done here...
connectToLinkUsingIndex(BigraphEntity.NodeEntity<Control>, BigraphEntity, int) - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
connectToLinkUsingIndex(BigraphEntity.NodeEntity<Control>, BigraphEntity, int) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
containsBigraph(String) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem: Check if a bigraph is present in the graph as a state.
context() - Static method in class org.bigraphs.framework.core.factory.BigraphFactory: Return the current factory context.
ContextIsNotActive - Exception in org.bigraphs.framework.core.exceptions: In the definition of a reaction, the site of the context must be active, where the part of the redex is rewritten.
ContextIsNotActive(int) - Constructor for exception org.bigraphs.framework.core.exceptions.ContextIsNotActive
ContextIsNotActive(int[]) - Constructor for exception org.bigraphs.framework.core.exceptions.ContextIsNotActive
Control<NT extends NamedType,T extends FiniteOrdinal> - Interface in org.bigraphs.framework.core: Super interface for all control representations.
ControlBuilder<NT extends NamedType<?>,V extends FiniteOrdinal<?>,B extends ControlBuilder<NT,V,B>> - Class in org.bigraphs.framework.core: Abstract class for all control builder implementations.
ControlBuilder() - Constructor for class org.bigraphs.framework.core.ControlBuilder
ControlIsAtomicException - Exception in org.bigraphs.framework.core.exceptions: Exception that is thrown when it is tried to nest a another node within an atomic node.
ControlIsAtomicException() - Constructor for exception org.bigraphs.framework.core.exceptions.ControlIsAtomicException
ControlLinkPair(Control<?, ?>, BigraphEntity.Link) - Constructor for class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter.ControlLinkPair
ControlNotExistsException - Exception in org.bigraphs.framework.core.exceptions.builder
ControlNotExistsException() - Constructor for exception org.bigraphs.framework.core.exceptions.builder.ControlNotExistsException
ControlNotExistsException(String) - Constructor for exception org.bigraphs.framework.core.exceptions.builder.ControlNotExistsException
controlPortNamePortIndexMapping - Variable in class org.bigraphs.framework.converter.bigred.DefaultSignatureXMLLoader: A map that maps for each control name the port name to an index (normally, ports don't have labels but are numbered)
controls - Variable in class org.bigraphs.framework.core.AbstractEcoreSignature
ControlStatus - Enum Class in org.bigraphs.framework.core: Enum that represents the kind/status of a control.
convert(String, String) - Method in class org.bigraphs.framework.visualization.auxiliary.GraphvizProcess
convert(Bigraph<S>, File, Format, boolean) - Method in class org.bigraphs.framework.visualization.BigraphGraphvizExporter: Converts a bigraph into DOT format ready to be visualized.
copy(Bigraph<S>) - Static method in class org.bigraphs.framework.core.utils.BigraphUtil
copy(EcoreBigraph) - Static method in class org.bigraphs.framework.core.utils.BigraphUtil
copyAttributes(B, B) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem
copyIfSame(Bigraph<S>, Bigraph<S>) - Static method in class org.bigraphs.framework.core.utils.BigraphUtil
countRoots(Map<Integer, Integer>) - Method in class org.bigraphs.framework.core.analysis.PureLinkGraphConnectedComponents.UnionFind
create() - Static method in class org.bigraphs.framework.core.analysis.BigraphDecomposer
create() - Method in class org.bigraphs.framework.core.datatypes.EMetaModelData.MetaModelDataBuilder: Creates an instance of EMetaModelData.
create() - Method in class org.bigraphs.framework.core.impl.signature.DynamicSignatureBuilder
create() - Method in class org.bigraphs.framework.core.impl.signature.KindSignatureBuilder
create() - Static method in class org.bigraphs.framework.core.reactivesystem.InstantiationMap: Creates an empty instantiation map.
create() - Method in class org.bigraphs.framework.core.SignatureBuilder: Create the signature with the assigned controls so far.
create() - Static method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions
create() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions.Builder
create() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.TransitionOptions.Builder
create(int) - Static method in class org.bigraphs.framework.core.reactivesystem.InstantiationMap: Creates an identity-like (thus, linear) instantiation map for "n"-sites-to-roots mappings.
create(KindSignature) - Static method in class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder: Should not be directly called by the user.
create(KindSignature, EPackage, String) - Static method in class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder
create(KindSignature, String) - Static method in class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder
create(KindSignature, String, String) - Static method in class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder: Should not be directly called by the user.
create(KindSignature, EMetaModelData) - Static method in class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder: Should not be directly called by the user.
create(KindSignature, EPackage, EObject) - Static method in class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder
create(EObject) - Static method in class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder
create(EObject) - Static method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
create(EObject, Class<T>) - Static method in class org.bigraphs.framework.core.impl.BigraphEntity
create(EObject, String) - Static method in class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder
create(EObject, String) - Static method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
create(EObject, String, String) - Static method in class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder
create(EObject, String, String) - Static method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
create(EObject, EMetaModelData) - Static method in class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder
create(EObject, EMetaModelData) - Static method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
create(EObject, EPackage, EObject) - Static method in class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder
create(EObject, EPackage, EObject) - Static method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
create(S) - Static method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Should not be directly called by the user.
create(S, EPackage, String) - Static method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
create(S, String) - Static method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
create(S, String, String) - Static method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Should not be directly called by the user.
create(S, EMetaModelData) - Static method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Should not be directly called by the user.
create(S, EPackage, EObject) - Static method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
create(B) - Static method in class org.bigraphs.framework.simulation.modelchecking.predicates.BigraphIsoPredicate
create(B) - Static method in class org.bigraphs.framework.simulation.modelchecking.predicates.SubBigraphMatchPredicate
create(B, boolean) - Static method in class org.bigraphs.framework.simulation.modelchecking.predicates.BigraphIsoPredicate
create(B, boolean) - Static method in class org.bigraphs.framework.simulation.modelchecking.predicates.SubBigraphMatchPredicate
create(Class) - Static method in class org.bigraphs.framework.simulation.matching.AbstractBigraphMatcher
create(BigraphDecompositionStrategy.DecompositionStrategy) - Static method in class org.bigraphs.framework.core.analysis.BigraphDecomposer
create(BigraphDecompositionStrategy.DecompositionStrategy, Class<T>) - Static method in class org.bigraphs.framework.core.analysis.BigraphDecomposer
create(EMetaModelData) - Method in class org.bigraphs.framework.core.impl.signature.DynamicSignatureBuilder
create(EMetaModelData) - Method in class org.bigraphs.framework.core.impl.signature.KindSignatureBuilder
create(EMetaModelData) - Method in class org.bigraphs.framework.core.SignatureBuilder
create(DefaultDynamicControl, MutableList<DefaultDynamicControl>) - Static method in class org.bigraphs.framework.core.impl.signature.KindSort
createAttr() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to create a child-element of type attr (see GXL-DTD).
createAttr() - Method in class GCF.DefaultImpl2.GXLAttributedAPI: Method to create a child-element of type attr (see GXL-DTD).
createAttr() - Method in class GCF.DefaultImpl2.GXLBagAPIImpl: Method to create a child-element of type attr (see GXL-DTD).
createAttr() - Method in class GCF.DefaultImpl2.GXLEdgeAPIImpl: Method to create a child-element of type attr (see GXL-DTD).
createAttr() - Method in class GCF.DefaultImpl2.GXLNodeAPIImpl: Method to create a child-element of type attr (see GXL-DTD).
createAttr() - Method in class GCF.DefaultImpl2.GXLRelAPIImpl: Method to create a child-element of type attr (see GXL-DTD).
createAttr() - Method in class GCF.DefaultImpl2.GXLRelendAPIImpl: Method to create a child-element of type attr (see GXL-DTD).
createAttr() - Method in class GCF.DefaultImpl2.GXLSeqAPIImpl: Method to create a child-element of type attr (see GXL-DTD).
createAttr() - Method in class GCF.DefaultImpl2.GXLSetAPIImpl: Method to create a child-element of type attr (see GXL-DTD).
createAttr() - Method in class GCF.DefaultImpl2.GXLTupAPIImpl: Method to create a child-element of type attr (see GXL-DTD).
createAttr() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type attr (see GXL-DTD).
createAttr() - Method in class GCF.DefaultImpl3.GXLAttributedAPI: Method to create a child-element of type attr (see GXL-DTD).
createAttr() - Method in class GCF.DefaultImpl3.GXLBagAPIImpl: Method to create a child-element of type attr (see GXL-DTD).
createAttr() - Method in class GCF.DefaultImpl3.GXLEdgeAPIImpl: Method to create a child-element of type attr (see GXL-DTD).
createAttr() - Method in class GCF.DefaultImpl3.GXLNodeAPIImpl: Method to create a child-element of type attr (see GXL-DTD).
createAttr() - Method in class GCF.DefaultImpl3.GXLRelAPIImpl: Method to create a child-element of type attr (see GXL-DTD).
createAttr() - Method in class GCF.DefaultImpl3.GXLRelendAPIImpl: Method to create a child-element of type attr (see GXL-DTD).
createAttr() - Method in class GCF.DefaultImpl3.GXLSeqAPIImpl: Method to create a child-element of type attr (see GXL-DTD).
createAttr() - Method in class GCF.DefaultImpl3.GXLSetAPIImpl: Method to create a child-element of type attr (see GXL-DTD).
createAttr() - Method in class GCF.DefaultImpl3.GXLTupAPIImpl: Method to create a child-element of type attr (see GXL-DTD).
createAttr() - Method in class GCF.original.GXLAttributedAPI: Method to create a child-element of type attr (see GXL-DTD).
createAttr() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttributedAPI: Method to create a child-element of type attr (see GXL-DTD).
createBag() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to create a child-element of type bag (see GXL-DTD).
createBag() - Method in class GCF.DefaultImpl2.GXLBagAPIImpl: Method to create a child-element of type bag (see GXL-DTD).
createBag() - Method in class GCF.DefaultImpl2.GXLSeqAPIImpl: Method to create a child-element of type bag (see GXL-DTD).
createBag() - Method in class GCF.DefaultImpl2.GXLSetAPIImpl: Method to create a child-element of type bag (see GXL-DTD).
createBag() - Method in interface GCF.DefaultImpl2.GXLStandardValueMethods
createBag() - Method in class GCF.DefaultImpl2.GXLTupAPIImpl: Method to create a child-element of type bag (see GXL-DTD).
createBag() - Method in class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type bag (see GXL-DTD).
createBag() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type bag (see GXL-DTD).
createBag() - Method in class GCF.DefaultImpl3.GXLBagAPIImpl: Method to create a child-element of type bag (see GXL-DTD).
createBag() - Method in class GCF.DefaultImpl3.GXLSeqAPIImpl: Method to create a child-element of type bag (see GXL-DTD).
createBag() - Method in class GCF.DefaultImpl3.GXLSetAPIImpl: Method to create a child-element of type bag (see GXL-DTD).
createBag() - Method in interface GCF.DefaultImpl3.GXLStandardValueMethods
createBag() - Method in class GCF.DefaultImpl3.GXLTupAPIImpl: Method to create a child-element of type bag (see GXL-DTD).
createBag() - Method in class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type bag (see GXL-DTD).
createBag() - Method in class GCF.original.GXLAttrAPIImpl: Method to create a child-element of type bag (see GXL-DTD).
createBag() - Method in interface GCF.original.GXLStandardValueMethods
createBag() - Method in class GCF.original.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type bag (see GXL-DTD).
createBag() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Method to create a child-element of type bag (see GXL-DTD).
createBag() - Method in interface org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardValueMethods
createBag() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type bag (see GXL-DTD).
createBBigraphContainer(Collection<BigraphEntity.RootEntity>, Collection<BigraphEntity.Edge>, Collection<BigraphEntity.InnerName>, Collection<BigraphEntity.OuterName>) - Method in class org.bigraphs.framework.core.BigraphBuilderSupport
createBigraph() - Method in interface org.bigraphs.framework.core.BigraphBuilder
createBigraph() - Method in interface org.bigraphs.framework.core.BigraphBuilder.NodeHierarchy
createBigraph() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
createBigraph() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy
createBigraphBuilder(Signature<?>) - Method in class org.bigraphs.framework.core.factory.AbstractBigraphFactory: Throws a class cast exception when a signature is passed as argument which was not created with the SignatureBuilder created by the same instance of this factory.
createBigraphBuilder(Signature<?>) - Method in class org.bigraphs.framework.core.factory.KindBigraphFactory
createBigraphBuilder(Signature<?>) - Method in class org.bigraphs.framework.core.factory.PureBigraphFactory
createBigraphBuilder(Signature<?>, String) - Method in class org.bigraphs.framework.core.factory.AbstractBigraphFactory
createBigraphBuilder(Signature<?>, String) - Method in class org.bigraphs.framework.core.factory.KindBigraphFactory
createBigraphBuilder(Signature<?>, String) - Method in class org.bigraphs.framework.core.factory.PureBigraphFactory
createBigraphBuilder(Signature<?>, EMetaModelData) - Method in class org.bigraphs.framework.core.factory.AbstractBigraphFactory: Throws a class cast exception when a signature is passed as argument which was not created with the SignatureBuilder created by the same instance of this factory.
createBigraphBuilder(Signature<?>, EMetaModelData) - Method in class org.bigraphs.framework.core.factory.KindBigraphFactory
createBigraphBuilder(Signature<?>, EMetaModelData) - Method in class org.bigraphs.framework.core.factory.PureBigraphFactory
createBigraphBuilder(Signature<?>, EPackage) - Method in class org.bigraphs.framework.core.factory.AbstractBigraphFactory
createBigraphBuilder(Signature<?>, EPackage) - Method in class org.bigraphs.framework.core.factory.KindBigraphFactory
createBigraphBuilder(Signature<?>, EPackage) - Method in class org.bigraphs.framework.core.factory.PureBigraphFactory
createBipartiteGraph(List<BigraphEntity<?>>, List<BigraphEntity<?>>) - Static method in class org.bigraphs.framework.simulation.matching.BigraphMatchingSupport: Helper function to create a bipartite graph.
createBool() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to create a child-element of type bool (see GXL-DTD).
createBool() - Method in class GCF.DefaultImpl2.GXLBagAPIImpl: Method to create a child-element of type bool (see GXL-DTD).
createBool() - Method in class GCF.DefaultImpl2.GXLSeqAPIImpl: Method to create a child-element of type bool (see GXL-DTD).
createBool() - Method in class GCF.DefaultImpl2.GXLSetAPIImpl: Method to create a child-element of type bool (see GXL-DTD).
createBool() - Method in interface GCF.DefaultImpl2.GXLStandardValueMethods
createBool() - Method in class GCF.DefaultImpl2.GXLTupAPIImpl: Method to create a child-element of type bool (see GXL-DTD).
createBool() - Method in class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type bool (see GXL-DTD).
createBool() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type bool (see GXL-DTD).
createBool() - Method in class GCF.DefaultImpl3.GXLBagAPIImpl: Method to create a child-element of type bool (see GXL-DTD).
createBool() - Method in class GCF.DefaultImpl3.GXLSeqAPIImpl: Method to create a child-element of type bool (see GXL-DTD).
createBool() - Method in class GCF.DefaultImpl3.GXLSetAPIImpl: Method to create a child-element of type bool (see GXL-DTD).
createBool() - Method in interface GCF.DefaultImpl3.GXLStandardValueMethods
createBool() - Method in class GCF.DefaultImpl3.GXLTupAPIImpl: Method to create a child-element of type bool (see GXL-DTD).
createBool() - Method in class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type bool (see GXL-DTD).
createBool() - Method in class GCF.original.GXLAttrAPIImpl: Method to create a child-element of type bool (see GXL-DTD).
createBool() - Method in interface GCF.original.GXLStandardValueMethods
createBool() - Method in class GCF.original.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type bool (see GXL-DTD).
createBool() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Method to create a child-element of type bool (see GXL-DTD).
createBool() - Method in interface org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardValueMethods
createBool() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type bool (see GXL-DTD).
createByType(BigridGenerator.DiscreteIons.NodeType) - Method in class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons: Deprecated.
createClosure(String, int, Bigraph<?>, Linkings<DefaultDynamicSignature>) - Method in class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons: Deprecated.

Helper method to create a closure (node-free bigraph, a linking)
createControl(String, int, boolean) - Static method in class org.bigraphs.framework.converter.jlibbig.JLibBigBigraphEncoder
createControlBuilder() - Method in class org.bigraphs.framework.core.impl.signature.DynamicSignatureBuilder
createControlBuilder() - Method in class org.bigraphs.framework.core.impl.signature.KindSignatureBuilder
createControlBuilder() - Method in class org.bigraphs.framework.core.SignatureBuilder: Hook method to be implemented by subclasses for creating the corresponding control builder (i.e., only active or dynamic controls).
createDefaultDynamicControl(StringTypedName, FiniteOrdinal<Integer>, ControlStatus) - Static method in class org.bigraphs.framework.core.impl.signature.DefaultDynamicControl
createDiscreteIon(String, Set<String>, DefaultDynamicSignature) - Method in class org.bigraphs.framework.core.factory.PureBigraphFactory: Convenient method.
createDiscreteIon(String, Set<String>, DefaultDynamicSignature, EPackage) - Method in class org.bigraphs.framework.core.factory.PureBigraphFactory
createDiscreteIon(String, Set<String>, KindSignature) - Method in class org.bigraphs.framework.core.factory.KindBigraphFactory: Convenient method.
createDiscreteIon(String, Set<String>, KindSignature, EPackage) - Method in class org.bigraphs.framework.core.factory.KindBigraphFactory
createDiscreteIon(String, Set<String>, S) - Method in class org.bigraphs.framework.core.factory.AbstractBigraphFactory
createDiscreteIon(String, Set<String>, S, EPackage) - Method in class org.bigraphs.framework.core.factory.AbstractBigraphFactory
createDiscreteIon(NamedType<?>, Set<NamedType<?>>, DefaultDynamicSignature) - Method in class org.bigraphs.framework.core.factory.PureBigraphFactory: Throws a runtime exception either because of InvalidConnectionException or TypeNotExistsException when connecting the outer names to the node.
createDiscreteIon(NamedType<?>, Set<NamedType<?>>, KindSignature) - Method in class org.bigraphs.framework.core.factory.KindBigraphFactory: Throws a runtime exception either because of InvalidConnectionException or TypeNotExistsException when connecting the outer names to the node.
createDiscreteIon(NamedType<?>, Set<NamedType<?>>, S) - Method in class org.bigraphs.framework.core.factory.AbstractBigraphFactory: Throws a runtime exception either because of InvalidConnectionException or TypeNotExistsException when connecting the outer names to the node.
createDoctypeDecl(String, String, String) - Method in class GCF.DefaultImpl2.GXLGXLAPIImpl: Method to create the DOCTYPE declaration of the GXL-document..
createDoctypeDecl(String, String, String) - Method in class GCF.DefaultImpl3.GXLGXLAPIImpl: Method to create the DOCTYPE declaration of the GXL-document..
createDoctypeDecl(String, String, String) - Method in class GCF.original.GXLGXLAPIImpl: Method to create the DOCTYPE declaration of the GXL-document..
createDoctypeDecl(String, String, String) - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLGXLAPIImpl: Method to create the DOCTYPE declaration of the GXL-document..
createEClass(String) - Static method in class org.bigraphs.framework.core.utils.emf.EMFUtils
createEdge() - Method in class GCF.DefaultImpl2.GXLGraphAPIImpl: Method to create a child-element of type edge (see GXL-DTD).
createEdge() - Method in class GCF.DefaultImpl3.GXLGraphAPIImpl: Method to create a child-element of type edge (see GXL-DTD).
createEdge() - Method in class GCF.original.GXLGraphAPIImpl: Method to create a child-element of type edge (see GXL-DTD).
createEdge() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLGraphAPIImpl: Method to create a child-element of type edge (see GXL-DTD).
createEdgeOfEClass() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Creates an edge of EClass de.tudresden.inf.st.bigraphs.models.bigraphBaseModel.BEdge and adds it to the list of available edges availableEdges.
createEdgeOfEClass(EObject) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
createEdgeOfEClass0(String) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
createEmpty() - Method in class org.bigraphs.framework.core.impl.signature.DynamicSignatureBuilder
createEmpty() - Method in class org.bigraphs.framework.core.impl.signature.KindSignatureBuilder
createEmpty() - Method in class org.bigraphs.framework.core.SignatureBuilder: Creates an empty signature, meaning that the control set is empty.
Needed for the interaction of elementary bigraphs and user-defined bigraphs.
createEmptyStub() - Method in class org.bigraphs.framework.core.impl.signature.DynamicSignatureBuilder: Creates an empty signature without controls.
createEmptyStub() - Method in class org.bigraphs.framework.core.impl.signature.KindSignatureBuilder
createEmptyStub() - Method in class org.bigraphs.framework.core.SignatureBuilder: This method is not called by the user; it is called by SignatureBuilder.createEmpty().
createEnum() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to create a child-element of type enum (see GXL-DTD).
createEnum() - Method in class GCF.DefaultImpl2.GXLBagAPIImpl: Method to create a child-element of type enum (see GXL-DTD).
createEnum() - Method in class GCF.DefaultImpl2.GXLSeqAPIImpl: Method to create a child-element of type enum (see GXL-DTD).
createEnum() - Method in class GCF.DefaultImpl2.GXLSetAPIImpl: Method to create a child-element of type enum (see GXL-DTD).
createEnum() - Method in interface GCF.DefaultImpl2.GXLStandardValueMethods
createEnum() - Method in class GCF.DefaultImpl2.GXLTupAPIImpl: Method to create a child-element of type enum (see GXL-DTD).
createEnum() - Method in class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type enum (see GXL-DTD).
createEnum() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type enum (see GXL-DTD).
createEnum() - Method in class GCF.DefaultImpl3.GXLBagAPIImpl: Method to create a child-element of type enum (see GXL-DTD).
createEnum() - Method in class GCF.DefaultImpl3.GXLSeqAPIImpl: Method to create a child-element of type enum (see GXL-DTD).
createEnum() - Method in class GCF.DefaultImpl3.GXLSetAPIImpl: Method to create a child-element of type enum (see GXL-DTD).
createEnum() - Method in interface GCF.DefaultImpl3.GXLStandardValueMethods
createEnum() - Method in class GCF.DefaultImpl3.GXLTupAPIImpl: Method to create a child-element of type enum (see GXL-DTD).
createEnum() - Method in class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type enum (see GXL-DTD).
createEnum() - Method in class GCF.original.GXLAttrAPIImpl: Method to create a child-element of type enum (see GXL-DTD).
createEnum() - Method in interface GCF.original.GXLStandardValueMethods
createEnum() - Method in class GCF.original.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type enum (see GXL-DTD).
createEnum() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Method to create a child-element of type enum (see GXL-DTD).
createEnum() - Method in interface org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardValueMethods
createEnum() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type enum (see GXL-DTD).
createFileSystemManager() - Method in class org.bigraphs.framework.core.utils.auxiliary.MemoryOperations
createFloat() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to create a child-element of type float (see GXL-DTD).
createFloat() - Method in class GCF.DefaultImpl2.GXLBagAPIImpl: Method to create a child-element of type float (see GXL-DTD).
createFloat() - Method in class GCF.DefaultImpl2.GXLSeqAPIImpl: Method to create a child-element of type float (see GXL-DTD).
createFloat() - Method in class GCF.DefaultImpl2.GXLSetAPIImpl: Method to create a child-element of type float (see GXL-DTD).
createFloat() - Method in interface GCF.DefaultImpl2.GXLStandardValueMethods
createFloat() - Method in class GCF.DefaultImpl2.GXLTupAPIImpl: Method to create a child-element of type float (see GXL-DTD).
createFloat() - Method in class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type float (see GXL-DTD).
createFloat() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type float (see GXL-DTD).
createFloat() - Method in class GCF.DefaultImpl3.GXLBagAPIImpl: Method to create a child-element of type float (see GXL-DTD).
createFloat() - Method in class GCF.DefaultImpl3.GXLSeqAPIImpl: Method to create a child-element of type float (see GXL-DTD).
createFloat() - Method in class GCF.DefaultImpl3.GXLSetAPIImpl: Method to create a child-element of type float (see GXL-DTD).
createFloat() - Method in interface GCF.DefaultImpl3.GXLStandardValueMethods
createFloat() - Method in class GCF.DefaultImpl3.GXLTupAPIImpl: Method to create a child-element of type float (see GXL-DTD).
createFloat() - Method in class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type float (see GXL-DTD).
createFloat() - Method in class GCF.original.GXLAttrAPIImpl: Method to create a child-element of type float (see GXL-DTD).
createFloat() - Method in interface GCF.original.GXLStandardValueMethods
createFloat() - Method in class GCF.original.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type float (see GXL-DTD).
createFloat() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Method to create a child-element of type float (see GXL-DTD).
createFloat() - Method in interface org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardValueMethods
createFloat() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type float (see GXL-DTD).
createGraph() - Method in class GCF.DefaultImpl2.GXLEdgeAPIImpl: Method to create a child-element of type graph (see GXL-DTD).
createGraph() - Method in class GCF.DefaultImpl2.GXLGraphContainerAPI: Method to create a child-element of type graph (see GXL-DTD).
createGraph() - Method in class GCF.DefaultImpl2.GXLGXLAPIImpl: Method to create a child-element of type graph (see GXL-DTD).
createGraph() - Method in class GCF.DefaultImpl2.GXLNodeAPIImpl: Method to create a child-element of type graph (see GXL-DTD).
createGraph() - Method in class GCF.DefaultImpl2.GXLRelAPIImpl: Method to create a child-element of type graph (see GXL-DTD).
createGraph() - Method in class GCF.DefaultImpl3.GXLEdgeAPIImpl: Method to create a child-element of type graph (see GXL-DTD).
createGraph() - Method in class GCF.DefaultImpl3.GXLGraphContainerAPI: Method to create a child-element of type graph (see GXL-DTD).
createGraph() - Method in class GCF.DefaultImpl3.GXLGXLAPIImpl: Method to create a child-element of type graph (see GXL-DTD).
createGraph() - Method in class GCF.DefaultImpl3.GXLNodeAPIImpl: Method to create a child-element of type graph (see GXL-DTD).
createGraph() - Method in class GCF.DefaultImpl3.GXLRelAPIImpl: Method to create a child-element of type graph (see GXL-DTD).
createGraph() - Method in class GCF.original.GXLGraphContainerAPI: Method to create a child-element of type graph (see GXL-DTD).
createGraph() - Method in class GCF.original.GXLGXLAPIImpl: Method to create a child-element of type graph (see GXL-DTD).
createGraph() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLGraphContainerAPI: Method to create a child-element of type graph (see GXL-DTD).
createGraph() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLGXLAPIImpl: Method to create a child-element of type graph (see GXL-DTD).
createGXL() - Method in class GCF.DefaultImpl2.GXLGXLAPIImpl: Method to create a the GXL-Node (see GXL-DTD).
createGXL() - Method in class GCF.DefaultImpl3.GXLGXLAPIImpl: Method to create a the GXL-Node (see GXL-DTD).
createGXL() - Method in class GCF.original.GXLGXLAPIImpl: Method to create a the GXL-Node (see GXL-DTD).
createGXL() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLGXLAPIImpl: Method to create a the GXL-Node (see GXL-DTD).
createIndexSupplier() - Static method in class org.bigraphs.framework.core.BigraphBuilderSupport
createInnerName(String) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Returns the same inner name if it already exists under the same name
createInnerNameOfEClass(String) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
createInOrder(Collection<ReactionRule>) - Static method in class org.bigraphs.framework.simulation.modelchecking.reactions.AbstractReactionRuleSupplier
createInstance() - Static method in class org.bigraphs.framework.core.reactivesystem.analysis.ReactionGraphAnalysis: Create an instance of ReactionGraphAnalysis.
createInstance() - Static method in class org.bigraphs.framework.simulation.encoding.BigraphCanonicalForm
createInstance(boolean) - Static method in class org.bigraphs.framework.simulation.encoding.BigraphCanonicalForm
createInstanceModel(EPackage, S, Map<Integer, BigraphEntity.RootEntity>, Map<Integer, BigraphEntity.SiteEntity>, Map<String, BigraphEntity.NodeEntity>, Map<String, BigraphEntity.InnerName>, Map<String, BigraphEntity.OuterName>, Map<String, BigraphEntity.Edge>) - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
createInt() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to create a child-element of type int (see GXL-DTD).
createInt() - Method in class GCF.DefaultImpl2.GXLBagAPIImpl: Method to create a child-element of type int (see GXL-DTD).
createInt() - Method in class GCF.DefaultImpl2.GXLSeqAPIImpl: Method to create a child-element of type int (see GXL-DTD).
createInt() - Method in class GCF.DefaultImpl2.GXLSetAPIImpl: Method to create a child-element of type int (see GXL-DTD).
createInt() - Method in interface GCF.DefaultImpl2.GXLStandardValueMethods
createInt() - Method in class GCF.DefaultImpl2.GXLTupAPIImpl: Method to create a child-element of type int (see GXL-DTD).
createInt() - Method in class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type int (see GXL-DTD).
createInt() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type int (see GXL-DTD).
createInt() - Method in class GCF.DefaultImpl3.GXLBagAPIImpl: Method to create a child-element of type int (see GXL-DTD).
createInt() - Method in class GCF.DefaultImpl3.GXLSeqAPIImpl: Method to create a child-element of type int (see GXL-DTD).
createInt() - Method in class GCF.DefaultImpl3.GXLSetAPIImpl: Method to create a child-element of type int (see GXL-DTD).
createInt() - Method in interface GCF.DefaultImpl3.GXLStandardValueMethods
createInt() - Method in class GCF.DefaultImpl3.GXLTupAPIImpl: Method to create a child-element of type int (see GXL-DTD).
createInt() - Method in class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type int (see GXL-DTD).
createInt() - Method in class GCF.original.GXLAttrAPIImpl: Method to create a child-element of type int (see GXL-DTD).
createInt() - Method in interface GCF.original.GXLStandardValueMethods
createInt() - Method in class GCF.original.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type int (see GXL-DTD).
createInt() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Method to create a child-element of type int (see GXL-DTD).
createInt() - Method in interface org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardValueMethods
createInt() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type int (see GXL-DTD).
createLinkings(DefaultDynamicSignature) - Method in class org.bigraphs.framework.core.factory.PureBigraphFactory
createLinkings(DefaultDynamicSignature, EMetaModelData) - Method in class org.bigraphs.framework.core.factory.PureBigraphFactory
createLinkings(DefaultDynamicSignature, EPackage) - Method in class org.bigraphs.framework.core.factory.PureBigraphFactory
createLinkings(KindSignature) - Method in class org.bigraphs.framework.core.factory.KindBigraphFactory
createLinkings(KindSignature, EMetaModelData) - Method in class org.bigraphs.framework.core.factory.KindBigraphFactory
createLinkings(KindSignature, EPackage) - Method in class org.bigraphs.framework.core.factory.KindBigraphFactory
createLinkings(S) - Method in class org.bigraphs.framework.core.factory.AbstractBigraphFactory
createLinkings(S, EMetaModelData) - Method in class org.bigraphs.framework.core.factory.AbstractBigraphFactory
createLinkings(S, EPackage) - Method in class org.bigraphs.framework.core.factory.AbstractBigraphFactory
createLocator() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to create a child-element of type locator (see GXL-DTD).
createLocator() - Method in class GCF.DefaultImpl2.GXLBagAPIImpl: Method to create a child-element of type locator (see GXL-DTD).
createLocator() - Method in class GCF.DefaultImpl2.GXLSeqAPIImpl: Method to create a child-element of type locator (see GXL-DTD).
createLocator() - Method in class GCF.DefaultImpl2.GXLSetAPIImpl: Method to create a child-element of type locator (see GXL-DTD).
createLocator() - Method in interface GCF.DefaultImpl2.GXLStandardValueMethods
createLocator() - Method in class GCF.DefaultImpl2.GXLTupAPIImpl: Method to create a child-element of type locator (see GXL-DTD).
createLocator() - Method in class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type locator (see GXL-DTD).
createLocator() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type locator (see GXL-DTD).
createLocator() - Method in class GCF.DefaultImpl3.GXLBagAPIImpl: Method to create a child-element of type locator (see GXL-DTD).
createLocator() - Method in class GCF.DefaultImpl3.GXLSeqAPIImpl: Method to create a child-element of type locator (see GXL-DTD).
createLocator() - Method in class GCF.DefaultImpl3.GXLSetAPIImpl: Method to create a child-element of type locator (see GXL-DTD).
createLocator() - Method in interface GCF.DefaultImpl3.GXLStandardValueMethods
createLocator() - Method in class GCF.DefaultImpl3.GXLTupAPIImpl: Method to create a child-element of type locator (see GXL-DTD).
createLocator() - Method in class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type locator (see GXL-DTD).
createLocator() - Method in class GCF.original.GXLAttrAPIImpl: Method to create a child-element of type locator (see GXL-DTD).
createLocator() - Method in interface GCF.original.GXLStandardValueMethods
createLocator() - Method in class GCF.original.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type locator (see GXL-DTD).
createLocator() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Method to create a child-element of type locator (see GXL-DTD).
createLocator() - Method in interface org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardValueMethods
createLocator() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type locator (see GXL-DTD).
createMatchResult() - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphMatchingEngine: This methods builds the actual bigraphs determined by the matching algorithm (see PureBigraphMatchingEngine.beginMatch()).
createNameSupplier() - Method in class org.bigraphs.framework.core.BigraphCompositeSupport
createNameSupplier(int) - Method in class org.bigraphs.framework.core.BigraphCompositeSupport
createNameSupplier(String) - Static method in class org.bigraphs.framework.core.BigraphBuilderSupport
createNameSupplier(String) - Method in class org.bigraphs.framework.core.BigraphCompositeSupport
createNameSupplier(String) - Static method in interface org.bigraphs.framework.simulation.encoding.BigraphCanonicalFormSupport
createNameSupplier(String, int) - Method in class org.bigraphs.framework.core.BigraphCompositeSupport
createNewEdge(String) - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
createNewInnerName(String) - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
createNewNode(Control<?, ?>, String) - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
createNewOuterName(String) - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
createNewPortWithIndex(int) - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
createNewRoot(int) - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
createNewSite(int) - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
createNode() - Method in class GCF.DefaultImpl2.GXLGraphAPIImpl: Method to create a child-element of type node (see GXL-DTD).
createNode() - Method in class GCF.DefaultImpl3.GXLGraphAPIImpl: Method to create a child-element of type node (see GXL-DTD).
createNode() - Method in class GCF.original.GXLGraphAPIImpl: Method to create a child-element of type node (see GXL-DTD).
createNode() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLGraphAPIImpl: Method to create a child-element of type node (see GXL-DTD).
createNode(EObject, Control) - Static method in class org.bigraphs.framework.core.impl.BigraphEntity
createNode(String) - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph
createNodeOfEClass(String, Control) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
createNodeOfEClass(String, Control, String) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
createNorthSouthConnector(Bigraph<?>, Linkings<DefaultDynamicSignature>) - Method in class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons: Deprecated.

Helper methods that creates a wiring to connect rows of a bigrid
createOrGetBigraphMetaModel(S) - Static method in class org.bigraphs.framework.core.factory.BigraphFactory: Registers the bigraph metamodel.
createOrGetBigraphMetaModel(S, EMetaModelData) - Static method in class org.bigraphs.framework.core.factory.BigraphFactory: Registers the bigraph metamodel.
createOrGetSignature(EObject) - Static method in class org.bigraphs.framework.core.factory.BigraphFactory: Registers a signature metamodel.
createOrGetSignature(EObject, EMetaModelData) - Static method in class org.bigraphs.framework.core.factory.BigraphFactory: Registers a signature metamodel Overwrites the metadata of the metamodel.
createOrGetSignatureMetaModel(S) - Static method in class org.bigraphs.framework.core.factory.BigraphFactory
createOrGetSignatureMetaModel(S, EMetaModelData) - Static method in class org.bigraphs.framework.core.factory.BigraphFactory: Overwrites the metadata of the metamodel.
createOuterName(String) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: This method returns the same outer name if it already exists under the same name, otherwise it will be created and returned.
createOuterNameOfEClass(String) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
createOutputFile(String) - Static method in class GCF.DefaultImpl2.GXLOutputAPI: Creates an FileOutputStream if an outFile is given, otherwise uses System.out as the default outputstream.
createOutputFile(String) - Static method in class GCF.DefaultImpl3.GXLOutputAPI: Creates an FileOutputStream if an outFile is given, otherwise uses System.out as the default outputstream.
createOutputFile(String) - Static method in class GCF.original.GXLOutputAPI: Creates an FileOutputStream if an outFile is given, otherwise uses System.out as the default outputstream.
createOutputFile(String) - Static method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLOutputAPI: Creates an FileOutputStream if an outFile is given, otherwise uses System.out as the default outputstream.
createPackage(String, String, String) - Static method in class org.bigraphs.framework.core.utils.emf.EMFUtils
createPlacings(DefaultDynamicSignature) - Method in class org.bigraphs.framework.core.factory.PureBigraphFactory
createPlacings(DefaultDynamicSignature, EMetaModelData) - Method in class org.bigraphs.framework.core.factory.PureBigraphFactory
createPlacings(DefaultDynamicSignature, EPackage) - Method in class org.bigraphs.framework.core.factory.PureBigraphFactory
createPlacings(KindSignature) - Method in class org.bigraphs.framework.core.factory.KindBigraphFactory
createPlacings(KindSignature, EMetaModelData) - Method in class org.bigraphs.framework.core.factory.KindBigraphFactory
createPlacings(KindSignature, EPackage) - Method in class org.bigraphs.framework.core.factory.KindBigraphFactory
createPlacings(S) - Method in class org.bigraphs.framework.core.factory.AbstractBigraphFactory
createPlacings(S, EMetaModelData) - Method in class org.bigraphs.framework.core.factory.AbstractBigraphFactory
createPlacings(S, EPackage) - Method in class org.bigraphs.framework.core.factory.AbstractBigraphFactory
createPortWithIndex(int) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Helper method that creates a bigraphical port EObject with the given index.
createProcessingInstruction(String, String) - Method in class GCF.DefaultImpl2.GXLGXLAPIImpl: Method to create a Processing Instruction in the GXL-document..
createProcessingInstruction(String, String) - Method in class GCF.DefaultImpl3.GXLGXLAPIImpl: Method to create a Processing Instruction in the GXL-document..
createProcessingInstruction(String, String) - Method in class GCF.original.GXLGXLAPIImpl: Method to create a Processing Instruction in the GXL-document..
createProcessingInstruction(String, String) - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLGXLAPIImpl: Method to create a Processing Instruction in the GXL-document..
createRandom(Collection) - Static method in class org.bigraphs.framework.simulation.modelchecking.reactions.AbstractReactionRuleSupplier
createRandomBuilder(DefaultDynamicSignature) - Method in class org.bigraphs.framework.core.factory.AbstractBigraphFactory
createRandomBuilder(DefaultDynamicSignature, EPackage) - Method in class org.bigraphs.framework.core.factory.AbstractBigraphFactory
createRel() - Method in class GCF.DefaultImpl2.GXLGraphAPIImpl: Method to create a child-element of type rel (see GXL-DTD).
createRel() - Method in class GCF.DefaultImpl3.GXLGraphAPIImpl: Method to create a child-element of type rel (see GXL-DTD).
createRel() - Method in class GCF.original.GXLGraphAPIImpl: Method to create a child-element of type rel (see GXL-DTD).
createRel() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLGraphAPIImpl: Method to create a child-element of type rel (see GXL-DTD).
createRelend() - Method in class GCF.DefaultImpl2.GXLRelAPIImpl: Method to create a child-element of type relend (see GXL-DTD).
createRelend() - Method in class GCF.DefaultImpl3.GXLRelAPIImpl: Method to create a child-element of type relend (see GXL-DTD).
createRelend() - Method in class GCF.original.GXLRelAPIImpl: Method to create a child-element of type relend (see GXL-DTD).
createRelend() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLRelAPIImpl: Method to create a child-element of type relend (see GXL-DTD).
createRenaming(Map<String, String>, PureBigraph, Linkings<DefaultDynamicSignature>) - Method in class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons: Deprecated.

Helper method to create a renaming (node-free bigraph, a bijective substitution)
createRoot() - Method in interface org.bigraphs.framework.core.BigraphBuilder: Create a root node under which additional nodes or hierarchies can be place.
createRoot() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
createRootOfEClass(int) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
createSeq() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to create a child-element of type seq (see GXL-DTD).
createSeq() - Method in class GCF.DefaultImpl2.GXLBagAPIImpl: Method to create a child-element of type seq (see GXL-DTD).
createSeq() - Method in class GCF.DefaultImpl2.GXLSeqAPIImpl: Method to create a child-element of type seq (see GXL-DTD).
createSeq() - Method in class GCF.DefaultImpl2.GXLSetAPIImpl: Method to create a child-element of type seq (see GXL-DTD).
createSeq() - Method in interface GCF.DefaultImpl2.GXLStandardValueMethods
createSeq() - Method in class GCF.DefaultImpl2.GXLTupAPIImpl: Method to create a child-element of type seq (see GXL-DTD).
createSeq() - Method in class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type seq (see GXL-DTD).
createSeq() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type seq (see GXL-DTD).
createSeq() - Method in class GCF.DefaultImpl3.GXLBagAPIImpl: Method to create a child-element of type seq (see GXL-DTD).
createSeq() - Method in class GCF.DefaultImpl3.GXLSeqAPIImpl: Method to create a child-element of type seq (see GXL-DTD).
createSeq() - Method in class GCF.DefaultImpl3.GXLSetAPIImpl: Method to create a child-element of type seq (see GXL-DTD).
createSeq() - Method in interface GCF.DefaultImpl3.GXLStandardValueMethods
createSeq() - Method in class GCF.DefaultImpl3.GXLTupAPIImpl: Method to create a child-element of type seq (see GXL-DTD).
createSeq() - Method in class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type seq (see GXL-DTD).
createSeq() - Method in class GCF.original.GXLAttrAPIImpl: Method to create a child-element of type seq (see GXL-DTD).
createSeq() - Method in interface GCF.original.GXLStandardValueMethods
createSeq() - Method in class GCF.original.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type seq (see GXL-DTD).
createSeq() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Method to create a child-element of type seq (see GXL-DTD).
createSeq() - Method in interface org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardValueMethods
createSeq() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type seq (see GXL-DTD).
createSet() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to create a child-element of type set (see GXL-DTD).
createSet() - Method in class GCF.DefaultImpl2.GXLBagAPIImpl: Method to create a child-element of type set (see GXL-DTD).
createSet() - Method in class GCF.DefaultImpl2.GXLSeqAPIImpl: Method to create a child-element of type set (see GXL-DTD).
createSet() - Method in class GCF.DefaultImpl2.GXLSetAPIImpl: Method to create a child-element of type set (see GXL-DTD).
createSet() - Method in interface GCF.DefaultImpl2.GXLStandardValueMethods
createSet() - Method in class GCF.DefaultImpl2.GXLTupAPIImpl: Method to create a child-element of type set (see GXL-DTD).
createSet() - Method in class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type set (see GXL-DTD).
createSet() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type set (see GXL-DTD).
createSet() - Method in class GCF.DefaultImpl3.GXLBagAPIImpl: Method to create a child-element of type set (see GXL-DTD).
createSet() - Method in class GCF.DefaultImpl3.GXLSeqAPIImpl: Method to create a child-element of type set (see GXL-DTD).
createSet() - Method in class GCF.DefaultImpl3.GXLSetAPIImpl: Method to create a child-element of type set (see GXL-DTD).
createSet() - Method in interface GCF.DefaultImpl3.GXLStandardValueMethods
createSet() - Method in class GCF.DefaultImpl3.GXLTupAPIImpl: Method to create a child-element of type set (see GXL-DTD).
createSet() - Method in class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type set (see GXL-DTD).
createSet() - Method in class GCF.original.GXLAttrAPIImpl: Method to create a child-element of type set (see GXL-DTD).
createSet() - Method in interface GCF.original.GXLStandardValueMethods
createSet() - Method in class GCF.original.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type set (see GXL-DTD).
createSet() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Method to create a child-element of type set (see GXL-DTD).
createSet() - Method in interface org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardValueMethods
createSet() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type set (see GXL-DTD).
createSignatureBuilder() - Method in class org.bigraphs.framework.core.factory.AbstractBigraphFactory: Creates a builder for constructing pure dynamic signatures .
createSignatureBuilder() - Method in class org.bigraphs.framework.core.factory.KindBigraphFactory
createSignatureBuilder() - Method in class org.bigraphs.framework.core.factory.PureBigraphFactory
createSiteOfEClass(int) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
createString() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to create a child-element of type string (see GXL-DTD).
createString() - Method in class GCF.DefaultImpl2.GXLBagAPIImpl: Method to create a child-element of type string (see GXL-DTD).
createString() - Method in class GCF.DefaultImpl2.GXLSeqAPIImpl: Method to create a child-element of type string (see GXL-DTD).
createString() - Method in class GCF.DefaultImpl2.GXLSetAPIImpl: Method to create a child-element of type string (see GXL-DTD).
createString() - Method in interface GCF.DefaultImpl2.GXLStandardValueMethods
createString() - Method in class GCF.DefaultImpl2.GXLTupAPIImpl: Method to create a child-element of type string (see GXL-DTD).
createString() - Method in class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type string (see GXL-DTD).
createString() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type string (see GXL-DTD).
createString() - Method in class GCF.DefaultImpl3.GXLBagAPIImpl: Method to create a child-element of type string (see GXL-DTD).
createString() - Method in class GCF.DefaultImpl3.GXLSeqAPIImpl: Method to create a child-element of type string (see GXL-DTD).
createString() - Method in class GCF.DefaultImpl3.GXLSetAPIImpl: Method to create a child-element of type string (see GXL-DTD).
createString() - Method in interface GCF.DefaultImpl3.GXLStandardValueMethods
createString() - Method in class GCF.DefaultImpl3.GXLTupAPIImpl: Method to create a child-element of type string (see GXL-DTD).
createString() - Method in class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type string (see GXL-DTD).
createString() - Method in class GCF.original.GXLAttrAPIImpl: Method to create a child-element of type string (see GXL-DTD).
createString() - Method in interface GCF.original.GXLStandardValueMethods
createString() - Method in class GCF.original.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type string (see GXL-DTD).
createString() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Method to create a child-element of type string (see GXL-DTD).
createString() - Method in interface org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardValueMethods
createString() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type string (see GXL-DTD).
createSupplier() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem
createTup() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to create a child-element of type tup (see GXL-DTD).
createTup() - Method in class GCF.DefaultImpl2.GXLBagAPIImpl: Method to create a child-element of type tup (see GXL-DTD).
createTup() - Method in class GCF.DefaultImpl2.GXLSeqAPIImpl: Method to create a child-element of type tup (see GXL-DTD).
createTup() - Method in class GCF.DefaultImpl2.GXLSetAPIImpl: Method to create a child-element of type tup (see GXL-DTD).
createTup() - Method in interface GCF.DefaultImpl2.GXLStandardValueMethods
createTup() - Method in class GCF.DefaultImpl2.GXLTupAPIImpl: Method to create a child-element of type tup (see GXL-DTD).
createTup() - Method in class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type tup (see GXL-DTD).
createTup() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type tup (see GXL-DTD).
createTup() - Method in class GCF.DefaultImpl3.GXLBagAPIImpl: Method to create a child-element of type tup (see GXL-DTD).
createTup() - Method in class GCF.DefaultImpl3.GXLSeqAPIImpl: Method to create a child-element of type tup (see GXL-DTD).
createTup() - Method in class GCF.DefaultImpl3.GXLSetAPIImpl: Method to create a child-element of type tup (see GXL-DTD).
createTup() - Method in interface GCF.DefaultImpl3.GXLStandardValueMethods
createTup() - Method in class GCF.DefaultImpl3.GXLTupAPIImpl: Method to create a child-element of type tup (see GXL-DTD).
createTup() - Method in class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type tup (see GXL-DTD).
createTup() - Method in class GCF.original.GXLAttrAPIImpl: Method to create a child-element of type tup (see GXL-DTD).
createTup() - Method in interface GCF.original.GXLStandardValueMethods
createTup() - Method in class GCF.original.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type tup (see GXL-DTD).
createTup() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Method to create a child-element of type tup (see GXL-DTD).
createTup() - Method in interface org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardValueMethods
createTup() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Method to create a child-element of type tup (see GXL-DTD).
createType() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to create a child-element of type type (see GXL-DTD).
createType() - Method in class GCF.DefaultImpl2.GXLBagAPIImpl: Method to create a child-element of type type (see GXL-DTD).
createType() - Method in class GCF.DefaultImpl2.GXLEdgeAPIImpl: Method to create a child-element of type type (see GXL-DTD).
createType() - Method in class GCF.DefaultImpl2.GXLNodeAPIImpl: Method to create a child-element of type type (see GXL-DTD).
createType() - Method in class GCF.DefaultImpl2.GXLRelAPIImpl: Method to create a child-element of type type (see GXL-DTD).
createType() - Method in class GCF.DefaultImpl2.GXLSeqAPIImpl: Method to create a child-element of type type (see GXL-DTD).
createType() - Method in class GCF.DefaultImpl2.GXLSetAPIImpl: Method to create a child-element of type type (see GXL-DTD).
createType() - Method in class GCF.DefaultImpl2.GXLTupAPIImpl: Method to create a child-element of type type (see GXL-DTD).
createType() - Method in class GCF.DefaultImpl2.GXLTypedAndAttributedAPI: Method to create a child-element of type type (see GXL-DTD).
createType() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to create a child-element of type type (see GXL-DTD).
createType() - Method in class GCF.DefaultImpl3.GXLBagAPIImpl: Method to create a child-element of type type (see GXL-DTD).
createType() - Method in class GCF.DefaultImpl3.GXLEdgeAPIImpl: Method to create a child-element of type type (see GXL-DTD).
createType() - Method in class GCF.DefaultImpl3.GXLNodeAPIImpl: Method to create a child-element of type type (see GXL-DTD).
createType() - Method in class GCF.DefaultImpl3.GXLRelAPIImpl: Method to create a child-element of type type (see GXL-DTD).
createType() - Method in class GCF.DefaultImpl3.GXLSeqAPIImpl: Method to create a child-element of type type (see GXL-DTD).
createType() - Method in class GCF.DefaultImpl3.GXLSetAPIImpl: Method to create a child-element of type type (see GXL-DTD).
createType() - Method in class GCF.DefaultImpl3.GXLTupAPIImpl: Method to create a child-element of type type (see GXL-DTD).
createType() - Method in class GCF.DefaultImpl3.GXLTypedAndAttributedAPI: Method to create a child-element of type type (see GXL-DTD).
createType() - Method in class GCF.original.GXLTypedAndAttributedAPI: Method to create a child-element of type type (see GXL-DTD).
createType() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLTypedAndAttributedAPI: Method to create a child-element of type type (see GXL-DTD).
createWith(Iterable<? extends Control<NT, FO>>) - Method in class org.bigraphs.framework.core.SignatureBuilder: Create a signature with the given controls.
createWith(Iterable<? extends Control<StringTypedName, FiniteOrdinal<Integer>>>) - Method in class org.bigraphs.framework.core.impl.signature.DynamicSignatureBuilder: Creates a signature with the given controls.
createWith(Iterable<? extends Control<StringTypedName, FiniteOrdinal<Integer>>>) - Method in class org.bigraphs.framework.core.impl.signature.KindSignatureBuilder
createWith(Iterable<? extends Control<StringTypedName, FiniteOrdinal<Integer>>>, Collection<KindSort>) - Method in class org.bigraphs.framework.core.impl.signature.KindSignatureBuilder
createWith(Iterable<? extends Control<StringTypedName, FiniteOrdinal<Integer>>>, Collection<KindSort>, EMetaModelData) - Method in class org.bigraphs.framework.core.impl.signature.KindSignatureBuilder
current() - Static method in class org.bigraphs.framework.core.factory.FactoryCreationContext

D

decode(Bigraph) - Method in class org.bigraphs.framework.converter.jlibbig.JLibBigBigraphDecoder
decode(Bigraph, DefaultDynamicSignature) - Method in class org.bigraphs.framework.converter.jlibbig.JLibBigBigraphDecoder
decode(T) - Method in interface org.bigraphs.framework.converter.BigraphObjectDecoder
decoder - Variable in class org.bigraphs.framework.simulation.modelchecking.BreadthFirstSimulationStrategy: Deprecated.
decoder - Variable in class org.bigraphs.framework.simulation.modelchecking.BreadthFirstStrategy
decompose(B) - Method in class org.bigraphs.framework.core.analysis.BigraphDecomposer
decompose(B) - Method in interface org.bigraphs.framework.core.analysis.BigraphDecompositionStrategy
decompose(PureBigraph) - Method in class org.bigraphs.framework.core.analysis.PureLinkGraphConnectedComponents: Entrypoint of the algorithm.
decompositionStrategy - Variable in class org.bigraphs.framework.core.analysis.BigraphDecomposer
DEFAULT_DECOMPOSITION_STRATEGY - Static variable in class org.bigraphs.framework.core.analysis.BigraphDecomposer
DEFAULT_EDGE_PREFIX - Static variable in class org.bigraphs.framework.core.BigraphBuilderSupport
DEFAULT_ENCODING - Static variable in class org.bigraphs.framework.core.utils.emf.EMFUtils
DEFAULT_VERTEX_PREFIX - Static variable in class org.bigraphs.framework.core.BigraphBuilderSupport
DefaultBigraphModelsRegistryImpl - Class in org.bigraphs.framework.core.factory
DefaultBigraphModelsRegistryImpl() - Constructor for class org.bigraphs.framework.core.factory.DefaultBigraphModelsRegistryImpl
DefaultBigraphXMLLoader - Class in org.bigraphs.framework.converter.bigred: Class to load a BigRed XML file containing a bigraph instance.
DefaultBigraphXMLLoader() - Constructor for class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
DefaultBigraphXMLLoader(DefaultDynamicSignature) - Constructor for class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader: If the signature is provided, the signature XML file of the bigraph won't be parsed.
DefaultColorSupplier<V> - Class in org.bigraphs.framework.visualization: A supplier for the color of a node or edge in a graph.
DefaultColorSupplier() - Constructor for class org.bigraphs.framework.visualization.DefaultColorSupplier
DefaultColorSupplier(BigraphEntity) - Constructor for class org.bigraphs.framework.visualization.DefaultColorSupplier
DefaultDynamicControl - Class in org.bigraphs.framework.core.impl.signature: Immutable dynamic control.
DefaultDynamicControl(StringTypedName, FiniteOrdinal<Integer>) - Constructor for class org.bigraphs.framework.core.impl.signature.DefaultDynamicControl: Status will be set to ControlStatus.ACTIVE
DefaultDynamicSignature - Class in org.bigraphs.framework.core.impl.signature: Concrete implementation of a pure (dynamic) signature, where controls can be assigned a status = (active, passive, atomic).
DefaultDynamicSignature(Set<DefaultDynamicControl>) - Constructor for class org.bigraphs.framework.core.impl.signature.DefaultDynamicSignature
DefaultDynamicSignature(EObject) - Constructor for class org.bigraphs.framework.core.impl.signature.DefaultDynamicSignature: Create a dynamic signature object for the given Ecore instance model.
defaultEdgeStylesheet() - Static method in class org.bigraphs.framework.visualization.StyleConstants
DefaultLabeledNode(String, String) - Constructor for class org.bigraphs.framework.core.reactivesystem.ReactionGraph.DefaultLabeledNode
DefaultLabelSupplier - Class in org.bigraphs.framework.visualization: A generic supplier for String labels.
defaultNodeStylesheet() - Static method in class org.bigraphs.framework.visualization.StyleConstants
DefaultReactionRuleXMLLoader - Class in org.bigraphs.framework.converter.bigred: Class to load a BigRed XML file containing a reaction rule.
DefaultReactionRuleXMLLoader() - Constructor for class org.bigraphs.framework.converter.bigred.DefaultReactionRuleXMLLoader
DefaultReactionRuleXMLLoader(DefaultDynamicSignature) - Constructor for class org.bigraphs.framework.converter.bigred.DefaultReactionRuleXMLLoader: If the signature is provided, the signature XML file of the reaction rule won't be parsed.
DefaultShapeSupplier<V> - Class in org.bigraphs.framework.visualization: A supplier for the shape of a node.
DefaultShapeSupplier() - Constructor for class org.bigraphs.framework.visualization.DefaultShapeSupplier
DefaultShapeSupplier(BigraphEntity) - Constructor for class org.bigraphs.framework.visualization.DefaultShapeSupplier
DefaultSignatureModelsRegistryImpl - Class in org.bigraphs.framework.core.factory
DefaultSignatureModelsRegistryImpl() - Constructor for class org.bigraphs.framework.core.factory.DefaultSignatureModelsRegistryImpl
DefaultSignatureXMLLoader - Class in org.bigraphs.framework.converter.bigred: Class to load a BigRed XML file containing a signature.
DefaultSignatureXMLLoader() - Constructor for class org.bigraphs.framework.converter.bigred.DefaultSignatureXMLLoader
DefaultSimulationSpecXMLLoader - Class in org.bigraphs.framework.converter.bigred: Class to load a BigRed XML file containing a signature.
DefaultSimulationSpecXMLLoader(AbstractSimpleReactiveSystem<PureBigraph>) - Constructor for class org.bigraphs.framework.converter.bigred.DefaultSimulationSpecXMLLoader
degree(BigraphEntity.NodeEntity<?>, Bigraph<?>) - Method in class org.bigraphs.framework.simulation.matching.pure.IHSFilter
degreeOf(BigraphEntity) - Method in class org.bigraphs.framework.core.alg.generators.RandomBigraphGeneratorSupport
degreeOf(BigraphEntity<?>) - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter: Get the number of all in- and out-going edges of a node within the place graph.
degreeOf(BigraphEntity<?>) - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphRedexAdapter: Get the number of all in- and out-going edges of a node within the place graph.
delimiterForLabel - Variable in class org.bigraphs.framework.visualization.GraphicalFeatureSupplier
direction - Variable in class GCF.DefaultImpl2.GXLRelendAPIImpl
disableAllFormats() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions.Builder
disconnectPort(BigraphEntity.NodeEntity, int) - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
DiscreteIon<S extends AbstractEcoreSignature<? extends Control<? extends NamedType<?>,? extends FiniteOrdinal<?>>>> - Class in org.bigraphs.framework.core.impl.elementary: This class represents a discrete ion.
DiscreteIon(NamedType<?>, Set<NamedType<?>>, S, AbstractBigraphFactory<S>) - Constructor for class org.bigraphs.framework.core.impl.elementary.DiscreteIon
DiscreteIon(NamedType<?>, Set<NamedType<?>>, S, EPackage, AbstractBigraphFactory<S>) - Constructor for class org.bigraphs.framework.core.impl.elementary.DiscreteIon
DiscreteIons(DefaultDynamicSignature) - Constructor for class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons: Deprecated.
DistributedRandomNumberGenerator - Class in org.bigraphs.framework.core.utils: A distributed random number generator.
DistributedRandomNumberGenerator() - Constructor for class org.bigraphs.framework.core.utils.DistributedRandomNumberGenerator
document - Variable in class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder
domainSize() - Method in class org.bigraphs.framework.core.reactivesystem.InstantiationMap
doMeasureTime(boolean) - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions: Instruct the simulation to measure the time for individual steps of the current used simulation algorithm.
down() - Method in interface org.bigraphs.framework.core.BigraphBuilder.NodeHierarchy: Creates a new hierarchy builder where the last created node is the parent of this new hierarchy.
down() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy
DynamicControlBuilder - Class in org.bigraphs.framework.core.impl.signature: The concrete dynamic control builder used by the DynamicSignatureBuilder.
DynamicControlBuilder() - Constructor for class org.bigraphs.framework.core.impl.signature.DynamicControlBuilder
DynamicSignatureBuilder - Class in org.bigraphs.framework.core.impl.signature: The default signature with "dynamic" controls, meaning that controls can be active, passive or atomic.
DynamicSignatureBuilder() - Constructor for class org.bigraphs.framework.core.impl.signature.DynamicSignatureBuilder

E

ECLASS_BBASICSIGNATURE - Static variable in interface org.bigraphs.framework.core.BigraphMetaModelConstants.SignaturePackage
ECLASS_BCONTROL - Static variable in interface org.bigraphs.framework.core.BigraphMetaModelConstants.SignaturePackage
ECLASS_BCONTROLSTATUS - Static variable in interface org.bigraphs.framework.core.BigraphMetaModelConstants.SignaturePackage
ECLASS_BDYNAMICSIGNATURE - Static variable in interface org.bigraphs.framework.core.BigraphMetaModelConstants.SignaturePackage
ECLASS_BKINDPLACESORTINGS - Static variable in interface org.bigraphs.framework.core.BigraphMetaModelConstants.SignaturePackage
ECLASS_BKINDSIGNATURE - Static variable in interface org.bigraphs.framework.core.BigraphMetaModelConstants.SignaturePackage
ECLASS_BKINDSORTATOMIC - Static variable in interface org.bigraphs.framework.core.BigraphMetaModelConstants.SignaturePackage
ECLASS_KINDSORTNONATOMIC - Static variable in interface org.bigraphs.framework.core.BigraphMetaModelConstants.SignaturePackage
eClassHasSuperType(String, EClass) - Static method in class org.bigraphs.framework.core.utils.emf.EMFUtils
ECORE - Enum constant in enum class org.bigraphs.framework.core.BigraphFileModelManagement.Format
EcoreAgentConverter - Class in org.bigraphs.framework.converter.ecore
EcoreAgentConverter() - Constructor for class org.bigraphs.framework.converter.ecore.EcoreAgentConverter
EcoreAgentConverter(BigraphFileModelManagement.Format) - Constructor for class org.bigraphs.framework.converter.ecore.EcoreAgentConverter
EcoreBigraph<S extends AbstractEcoreSignature<?>> - Interface in org.bigraphs.framework.core: Common interface with standard methods for all Ecore-based bigraph classes.
EcoreBigraph.Stub<S extends AbstractEcoreSignature<?>> - Class in org.bigraphs.framework.core: A lightweight container for a bigraph that holds only the Ecore-relevant objects.
EcoreBigraphExt - Interface in org.bigraphs.framework.core: Marker interface for Ecore-based bigraphical object (e.g., a bigraph or signature) that provides just two basic methods to get the metamodel (EPackage), and the instance model (EObject).
EcoreBigraphFileSystemException - Exception in org.bigraphs.framework.core.exceptions: Indicates any error that happens during a bigraph model file operation.
EcoreBigraphFileSystemException() - Constructor for exception org.bigraphs.framework.core.exceptions.EcoreBigraphFileSystemException
EcoreBigraphFileSystemException(String) - Constructor for exception org.bigraphs.framework.core.exceptions.EcoreBigraphFileSystemException
EcoreBigraphFileSystemException(String, Throwable) - Constructor for exception org.bigraphs.framework.core.exceptions.EcoreBigraphFileSystemException
EcoreBigraphFileSystemException(String, Throwable, boolean, boolean) - Constructor for exception org.bigraphs.framework.core.exceptions.EcoreBigraphFileSystemException
EcoreBigraphFileSystemException(Throwable) - Constructor for exception org.bigraphs.framework.core.exceptions.EcoreBigraphFileSystemException
EcoreConverter - Class in org.bigraphs.framework.converter.ecore
EcoreConverter() - Constructor for class org.bigraphs.framework.converter.ecore.EcoreConverter
EcoreConverter(BigraphFileModelManagement.Format) - Constructor for class org.bigraphs.framework.converter.ecore.EcoreConverter
EcoreSignature - Interface in org.bigraphs.framework.core: Interface for all Ecore-based signatures.
EDGE - Enum constant in enum class org.bigraphs.framework.core.BigraphEntityType
edgeAdded(GraphEdgeChangeEvent<ReactionGraph.LabeledNode, ReactionGraph.LabeledEdge>) - Method in class org.bigraphs.framework.visualization.mxReactionGraph
edgeids - Variable in class GCF.DefaultImpl2.GXLGraphAPIImpl
edgeLabelSupplier() - Method in class org.bigraphs.framework.core.alg.generators.RandomBigraphGeneratorSupport
edgeLabelSupplier() - Method in class org.bigraphs.framework.core.analysis.PureLinkGraphConnectedComponents
edgemode - Variable in class GCF.DefaultImpl2.GXLGraphAPIImpl
edgeRemoved(GraphEdgeChangeEvent<ReactionGraph.LabeledNode, ReactionGraph.LabeledEdge>) - Method in class org.bigraphs.framework.visualization.mxReactionGraph
ELEMENTARY_ENCODINGS - Static variable in interface org.bigraphs.framework.simulation.encoding.BigraphCanonicalFormSupport: Elementary bigraphs are handled differently as their encoding exhibit rather a finalized static nature.
ElementaryBigraph<S extends AbstractEcoreSignature<? extends Control<?,?>>> - Class in org.bigraphs.framework.core: Interface for the basic building blocks for all Ecore-based bigraphs.
ElementaryBigraph(Bigraph<S>) - Constructor for class org.bigraphs.framework.core.ElementaryBigraph
Embedding() - Constructor for class org.bigraphs.framework.simulation.matching.pure.SubHypergraphIsoSearch.Embedding
Embedding(Map<? extends BigraphEntity.NodeEntity<?>, ? extends BigraphEntity.NodeEntity<?>>) - Constructor for class org.bigraphs.framework.simulation.matching.pure.SubHypergraphIsoSearch.Embedding
embeddings() - Method in class org.bigraphs.framework.simulation.matching.pure.SubHypergraphIsoSearch
EMetaModelData - Class in org.bigraphs.framework.core.datatypes: Meta data for bigraphical Ecore model files.
EMetaModelData.MetaModelDataBuilder - Class in org.bigraphs.framework.core.datatypes: Builder class to create EMetaModelData instances.
EMFUtils - Class in org.bigraphs.framework.core.utils.emf: A collection of helpful EMF model operations.
encode() - Method in class org.bigraphs.framework.converter.rankedgraph.PureBigraphRankedGraphEncoding
encode() - Method in class org.bigraphs.framework.core.AbstractRankedGraph
encode(B) - Method in interface org.bigraphs.framework.converter.BigraphObjectEncoder
encode(PureBigraph) - Method in class org.bigraphs.framework.converter.jlibbig.JLibBigBigraphEncoder
encode(PureBigraph, Signature) - Method in class org.bigraphs.framework.converter.jlibbig.JLibBigBigraphEncoder
encoder - Variable in class org.bigraphs.framework.simulation.modelchecking.BreadthFirstSimulationStrategy: Deprecated.
encoder - Variable in class org.bigraphs.framework.simulation.modelchecking.BreadthFirstStrategy
encodingFinished - Variable in class org.bigraphs.framework.core.AbstractRankedGraph
encodingStarted - Variable in class org.bigraphs.framework.core.AbstractRankedGraph
end() - Static method in class org.bigraphs.framework.core.factory.BigraphFactory
endorder - Variable in class GCF.DefaultImpl2.GXLRelendAPIImpl
EPACKAGE_NAME - Static variable in interface org.bigraphs.framework.core.BigraphMetaModelConstants.SignaturePackage
equals(Object) - Method in class org.bigraphs.framework.core.AbstractControl
equals(Object) - Method in class org.bigraphs.framework.core.AbstractEcoreSignature
equals(Object) - Method in class org.bigraphs.framework.core.datatypes.FiniteOrdinal
equals(Object) - Method in class org.bigraphs.framework.core.datatypes.StringTypedName
equals(Object) - Method in class org.bigraphs.framework.core.impl.BigraphEntity
equals(Object) - Method in class org.bigraphs.framework.core.impl.signature.DefaultDynamicControl
equals(Object) - Method in class org.bigraphs.framework.core.impl.signature.KindSort
equals(Object) - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph.CanonicalLabeledNode
equals(Object) - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph.DefaultLabeledNode
equals(Object) - Method in class org.bigraphs.framework.core.reactivesystem.TrackingMap
equals(Object) - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter.ControlLinkPair
execute() - Method in class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker: Perform the simulation based on the provided reactive system and options.
executeAsync() - Method in class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker: Asynchronously start the simulation based on the provided reactive system and options.
executeCommand(String) - Method in class org.bigraphs.framework.visualization.auxiliary.GraphvizProcess
executeValidationChain(EObject) - Static method in class org.bigraphs.framework.core.BigraphBuilderSupport: Executes various metamodel validators.
executorService - Static variable in class org.bigraphs.framework.simulation.matching.BigraphMatchingSupport
ExecutorServicePoolProvider - Interface in org.bigraphs.framework.core.providers
EXPORT - Enum constant in enum class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.Options
exportAsInstanceModel(EcoreBigraph, OutputStream) - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement.Store: Exports the Ecore-based instance model of a bigraph.
exportAsInstanceModel(EcoreBigraph, OutputStream, String) - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement.Store
exportAsInstanceModel(EcoreSignature, OutputStream) - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement.Store: Exports the Ecore-based instance model of a signature.
exportAsInstanceModel(EcoreSignature, OutputStream, String) - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement.Store
exportAsMetaModel(EcoreBigraph, OutputStream) - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement.Store: Exports the Ecore-based metamodel of a bigraph.
exportAsMetaModel(EcoreBigraph, Path) - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement.Store: Exports the Ecore-based metamodel of a bigraph.
exportAsMetaModel(EcoreSignature, OutputStream) - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement.Store: Exports the Ecore-based metamodel of a signature The filename must match the name of the EPackage.
exportOpts() - Static method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions
exportReactionGraph(ReactionGraph) - Method in class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker
exportState(B, String, String) - Method in class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker: Exports a bigraph to the filesystem using the export options setting from the member variable BigraphModelChecker.options.
extendBControlEClass(String, EPackage) - Method in class org.bigraphs.framework.core.AbstractEcoreSignature
extendBKindSortCompositeEClass(String, EPackage) - Method in class org.bigraphs.framework.core.AbstractEcoreSignature
extendBKindSortLeafEClass(String, EPackage) - Method in class org.bigraphs.framework.core.AbstractEcoreSignature

F

FactoryCreationContext - Class in org.bigraphs.framework.core.factory
find(int) - Method in class org.bigraphs.framework.core.analysis.PureLinkGraphConnectedComponents.UnionFind
findAllPathsInGraphToLeaves(ReactionGraph) - Method in class org.bigraphs.framework.core.reactivesystem.analysis.ReactionGraphAnalysis
findAllReferences(EClass) - Static method in class org.bigraphs.framework.core.utils.emf.EMFUtils
findAllReferences2(EClass) - Static method in class org.bigraphs.framework.core.utils.emf.EMFUtils
findAttribute(EClass, String) - Static method in class org.bigraphs.framework.core.utils.emf.EMFUtils
findFactoryFor(Class<? extends Bigraph>) - Static method in class org.bigraphs.framework.core.factory.FactoryCreationContext
FiniteOrdinal<T extends Number> - Class in org.bigraphs.framework.core.datatypes: Data type for a finite ordinal which is used to represent the arity of a control or a value in the interface of a bigraph.
FixedThreadPoolExecutorProvider - Class in org.bigraphs.framework.simulation.modelchecking: Default executor provider for the model checking task submission.
FixedThreadPoolExecutorProvider() - Constructor for class org.bigraphs.framework.simulation.modelchecking.FixedThreadPoolExecutorProvider
from - Variable in class GCF.DefaultImpl2.GXLEdgeAPIImpl
fromorder - Variable in class GCF.DefaultImpl2.GXLEdgeAPIImpl
fromString(String) - Static method in enum class org.bigraphs.framework.core.ControlStatus

G

GCF.DefaultImpl2 - package GCF.DefaultImpl2
GCF.DefaultImpl3 - package GCF.DefaultImpl3
GCF.original - package GCF.original
generate(int, int) - Method in class org.bigraphs.framework.core.alg.generators.BigridGenerator: Deprecated.
generate(int, int, float) - Method in class org.bigraphs.framework.core.alg.generators.PureBigraphGenerator
generate(int, int, float, float, float) - Method in class org.bigraphs.framework.core.alg.generators.PureBigraphGenerator
generate(int, int, int) - Method in class org.bigraphs.framework.core.alg.generators.PureBigraphGenerator
generate(int, int, int, float) - Method in class org.bigraphs.framework.core.alg.generators.PureBigraphGenerator
generate(int, int, int, float, float, float) - Method in class org.bigraphs.framework.core.alg.generators.PureBigraphGenerator: Number of roots t must be greater or equal 0.
get() - Method in class org.bigraphs.framework.simulation.modelchecking.reactions.InOrderReactionRuleSupplier
get() - Method in class org.bigraphs.framework.simulation.modelchecking.reactions.RandomAgentMatchSupplier
get() - Method in class org.bigraphs.framework.visualization.DefaultLabelSupplier
get() - Method in class org.bigraphs.framework.visualization.GraphicalFeatureSupplier
get() - Method in class org.bigraphs.framework.visualization.supplier.GraphvizColorSupplier
get() - Method in class org.bigraphs.framework.visualization.supplier.GraphvizShapeSupplier
get(int) - Method in class org.bigraphs.framework.core.reactivesystem.InstantiationMap
get(Class) - Static method in interface org.bigraphs.framework.simulation.encoding.hash.BigraphHashFunction: Factory method to create the respective hashing function class for the given bigraph class bClass.
get(ModelCheckingOptions.Options) - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions
getAgent() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem
getAgent() - Method in interface org.bigraphs.framework.core.reactivesystem.ReactiveSystem
getAgent() - Method in class org.bigraphs.framework.simulation.matching.AbstractBigraphMatcher: Returns the supplied agent passed via the AbstractBigraphMatcher.match(Bigraph, ReactionRule) method.
getAllInternalVerticesPostOrder() - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter: Internal vertices have children
getAllInternalVerticesPostOrderAsStream() - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter
getAllLeaves() - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter: Get all leaves of a the bigraph's place graph (i.e., a tree).
getAllLinks() - Method in interface org.bigraphs.framework.core.Bigraph
getAllLinks() - Method in class org.bigraphs.framework.core.BigraphDelegator
getAllLinks() - Method in class org.bigraphs.framework.core.ElementaryBigraph
getAllLinks() - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getAllLinks() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getAllPlaces() - Method in interface org.bigraphs.framework.core.Bigraph: Returns all places of the bigraph, i.e., roots, nodes and sites.
getAllPlaces() - Method in class org.bigraphs.framework.core.BigraphDelegator
getAllPlaces() - Method in class org.bigraphs.framework.core.ElementaryBigraph
getAllPlaces() - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Barren: Returns the single root of this barren.
getAllPlaces() - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getAllPlaces() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getAllVertices() - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter: Get all vertices (roots and nodes) without sites.
getAllVerticesBfsOrder() - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter
getAllVerticesBfsOrderFrom(BigraphEntity<?>) - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter
getAllVerticesBfsOrderStream() - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter
getAllVerticesPostOrder() - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter
getArity() - Method in class org.bigraphs.framework.core.AbstractControl
getArity() - Method in interface org.bigraphs.framework.core.Control: Returns the arity of the control
getArity() - Method in class org.bigraphs.framework.core.ControlBuilder
getArity(C) - Method in interface org.bigraphs.framework.core.Signature
getArity(String) - Method in interface org.bigraphs.framework.core.Signature
getAttributes() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to return a specific attribute.
getAttributes() - Method in class GCF.DefaultImpl2.GXLEdgeAPIImpl: Method to return a specific attribute.
getAttributes() - Method in class GCF.DefaultImpl2.GXLGraphAPIImpl: Method to return a specific attribute.
getAttributes() - Method in class GCF.DefaultImpl2.GXLLocatorAPIImpl: Method to return a specific attribute.
getAttributes() - Method in class GCF.DefaultImpl2.GXLNodeAPIImpl: Method to return a specific attribute.
getAttributes() - Method in class GCF.DefaultImpl2.GXLRelAPIImpl: Method to return a specific attribute.
getAttributes() - Method in class GCF.DefaultImpl2.GXLRelendAPIImpl: Method to return a specific attribute.
getAttributes() - Method in class GCF.DefaultImpl2.GXLStandardAPI: Method to return the list of attributes.
getAttributes() - Method in class GCF.DefaultImpl2.GXLTypeAPIImpl: Method to return a specific attribute.
getAttributes() - Method in class GCF.DefaultImpl3.GXLEdgeAPIImpl: Method to return a specific attribute.
getAttributes() - Method in class GCF.DefaultImpl3.GXLGraphAPIImpl: Method to return a specific attribute.
getAttributes() - Method in class GCF.DefaultImpl3.GXLLocatorAPIImpl: Method to return a specific attribute.
getAttributes() - Method in class GCF.DefaultImpl3.GXLNodeAPIImpl: Method to return a specific attribute.
getAttributes() - Method in class GCF.DefaultImpl3.GXLRelAPIImpl: Method to return a specific attribute.
getAttributes() - Method in class GCF.DefaultImpl3.GXLRelendAPIImpl: Method to return a specific attribute.
getAttributes() - Method in class GCF.DefaultImpl3.GXLStandardAPI: Method to return the list of attributes.
getAttributes() - Method in class GCF.DefaultImpl3.GXLTypeAPIImpl: Method to return a specific attribute.
getAttributes() - Method in class GCF.original.GXLStandardAPI: Method to return the list of attributs.
getAttributes() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardAPI: Method to return the list of attributes.
getAttributes() - Method in class org.bigraphs.framework.core.impl.BigraphEntity.NodeEntity
getAvailableEClasses() - Method in class org.bigraphs.framework.core.BigraphBuilderSupport
getAvailableEClasses() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
getAvailableEReferences() - Method in class org.bigraphs.framework.core.BigraphBuilderSupport
getAvailableEReferences() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
getAvailableRules() - Method in class org.bigraphs.framework.simulation.modelchecking.reactions.AbstractReactionRuleSupplier
getbBigraphObject() - Method in class org.bigraphs.framework.core.BigraphBuilderSupport.InstanceParameter
getBigraph() - Method in interface org.bigraphs.framework.core.reactivesystem.BMatchResult: This stores the rewritten bigraph for reference
getBigraph() - Method in class org.bigraphs.framework.core.reactivesystem.ReactiveSystemPredicate: Get the bigraph used in the predicate.
getBigraph() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingStrategySupport.MatchResult: This stores the rewritten bigraph for reference
getBigraph() - Method in class org.bigraphs.framework.simulation.modelchecking.predicates.AndPredicate
getBigraph() - Method in class org.bigraphs.framework.simulation.modelchecking.predicates.BigraphIsoPredicate
getBigraph() - Method in class org.bigraphs.framework.simulation.modelchecking.predicates.OrPredicate
getBigraph() - Method in class org.bigraphs.framework.simulation.modelchecking.predicates.SubBigraphMatchPredicate
getBigraphCanonicalForm() - Method in class org.bigraphs.framework.simulation.encoding.BigraphCanonicalFormStrategy
getBigraphClassType() - Method in enum class org.bigraphs.framework.core.analysis.BigraphDecompositionStrategy.DecompositionStrategy
getBigraphClassType() - Method in class org.bigraphs.framework.core.factory.AbstractBigraphFactory
getBigraphClassType() - Method in interface org.bigraphs.framework.core.factory.BigraphFactoryElement
getBigraphDelegate() - Method in class org.bigraphs.framework.core.BigraphDelegator
getBigraphDelegate() - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter
getBigraphToMatch() - Method in class org.bigraphs.framework.simulation.modelchecking.predicates.BigraphIsoPredicate
getBigraphToMatch() - Method in class org.bigraphs.framework.simulation.modelchecking.predicates.SubBigraphMatchPredicate
getBoundedReactiveSystem() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule.ReactiveSystemBoundReactionRule
getById(String) - Method in class org.bigraphs.framework.converter.rankedgraph.PureBigraphRankedGraphEncoding
getByIdAndType(String, BigraphEntityType) - Method in class org.bigraphs.framework.converter.rankedgraph.PureBigraphRankedGraphEncoding
getCallback() - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
getCandidates() - Method in class org.bigraphs.framework.simulation.matching.pure.SubHypergraphIsoSearch
getCanonicalForm() - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph.LabeledNode
getCanonicalString() - Method in interface org.bigraphs.framework.core.reactivesystem.BMatchResult: Get the canonical string of the agent for this match result
getCanonicalString() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingStrategySupport.MatchResult: The canonical encoding of the agent for this match result
getCellToEdgeMap() - Method in class org.bigraphs.framework.visualization.mxReactionGraph: Returns Hashmap which maps the visualization mxICells onto their edges.
getCellToVertexMap() - Method in class org.bigraphs.framework.visualization.mxReactionGraph: Returns Hashmap which maps the visualization mxICells onto their vertices.
getChecked() - Method in class org.bigraphs.framework.simulation.modelchecking.predicates.PredicateChecker: Get detailed information of the predicate evaluation after the method PredicateChecker.checkAll(Bigraph) was called.
getChildElements() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to get the List of child elements.
getChildElements() - Method in class GCF.DefaultImpl2.GXLBagAPIImpl: Method to get the List of child elements.
getChildElements() - Method in class GCF.DefaultImpl2.GXLEdgeAPIImpl: Method to get the List of child elements.
getChildElements() - Method in class GCF.DefaultImpl2.GXLGraphAPIImpl: Method to get the List of child elements.
getChildElements() - Method in class GCF.DefaultImpl2.GXLGXLAPIImpl: Method to get the List of child elements.
getChildElements() - Method in class GCF.DefaultImpl2.GXLLocatorAPIImpl: Method to get the List of child elements.
getChildElements() - Method in class GCF.DefaultImpl2.GXLNodeAPIImpl: Method to get the List of child elements.
getChildElements() - Method in class GCF.DefaultImpl2.GXLRelAPIImpl: Method to get the List of child elements.
getChildElements() - Method in class GCF.DefaultImpl2.GXLRelendAPIImpl: Method to get the List of child elements.
getChildElements() - Method in class GCF.DefaultImpl2.GXLSeqAPIImpl: Method to get the List of child elements.
getChildElements() - Method in class GCF.DefaultImpl2.GXLSetAPIImpl: Method to get the List of child elements.
getChildElements() - Method in class GCF.DefaultImpl2.GXLStandardAPI: Method to get the list of child elements.
getChildElements() - Method in class GCF.DefaultImpl2.GXLTupAPIImpl: Method to get the List of child elements.
getChildElements() - Method in class GCF.DefaultImpl2.GXLTypeAPIImpl: Method to get the List of child elements.
getChildElements() - Method in class GCF.DefaultImpl3.GXLEdgeAPIImpl: Method to get the List of child elements.
getChildElements() - Method in class GCF.DefaultImpl3.GXLGraphAPIImpl: Method to get the List of child elements.
getChildElements() - Method in class GCF.DefaultImpl3.GXLGXLAPIImpl: Method to get the List of child elements.
getChildElements() - Method in class GCF.DefaultImpl3.GXLLocatorAPIImpl: Method to get the List of child elements.
getChildElements() - Method in class GCF.DefaultImpl3.GXLNodeAPIImpl: Method to get the List of child elements.
getChildElements() - Method in class GCF.DefaultImpl3.GXLRelAPIImpl: Method to get the List of child elements.
getChildElements() - Method in class GCF.DefaultImpl3.GXLRelendAPIImpl: Method to get the List of child elements.
getChildElements() - Method in class GCF.DefaultImpl3.GXLStandardAPI: Method to get the list of child elements.
getChildElements() - Method in class GCF.DefaultImpl3.GXLTypeAPIImpl: Method to get the List of child elements.
getChildElements() - Method in class GCF.original.GXLStandardAPI: Method to get the list of child elements.
getChildElements() - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardAPI: Method to get the list of child elements.
getChildParentMap() - Method in class org.bigraphs.framework.core.analysis.PureLinkGraphConnectedComponents.UnionFind
getChildren(BigraphEntity<?>) - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter: Get all children of a bigraph node precluding all sites.
getChildrenForRoot(Map<Integer, Integer>, int) - Static method in class org.bigraphs.framework.core.analysis.PureLinkGraphConnectedComponents
getChildrenOf(BigraphEntity<?>) - Method in interface org.bigraphs.framework.core.Bigraph: Returns the set of children of a given node (including sites).
getChildrenOf(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.BigraphDelegator
getChildrenOf(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.ElementaryBigraph
getChildrenOf(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Permutation
getChildrenOf(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Symmetry
getChildrenOf(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getChildrenOf(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getChildrenWithSites(BigraphEntity<?>) - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphRedexAdapter
getCollapsedEdges() - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph.CollapsedLabeledEdge
getCollapsedNodes() - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph.CollapsedLabeledNode
getConditionMatcher() - Method in class org.bigraphs.framework.core.reactivesystem.ConditionalParametricRuleDecorator
getConnectedComponents() - Method in class org.bigraphs.framework.core.analysis.PureBigraphDecomposerImpl
getConnectedComponents() - Method in class org.bigraphs.framework.core.analysis.PureLinkGraphConnectedComponents: Get the connected component as disjoint bigraphs.
getContext() - Method in interface org.bigraphs.framework.core.reactivesystem.BigraphMatch: The context of the match
getContext() - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphParametricMatch
getContextBigraphResult() - Method in class org.bigraphs.framework.simulation.modelchecking.predicates.SubBigraphMatchPredicate
getContextIdentity() - Method in interface org.bigraphs.framework.core.reactivesystem.BigraphMatch: Identity link graph for the composition of the context and the redex image (see BigraphMatch.getRedexImage().
getContextIdentity() - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphParametricMatch: Note: The return type is of class Bigraph with a DefaultDynamicSignature.
getControl() - Method in class org.bigraphs.framework.core.AbstractRankedGraph.LabeledNode
getControl() - Method in class org.bigraphs.framework.core.impl.BigraphEntity
getControl() - Method in class org.bigraphs.framework.core.impl.signature.KindSort
getControl() - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter.ControlLinkPair
getControl(String, int) - Method in interface org.bigraphs.framework.core.Signature
getControl(String, int, ControlStatus) - Method in interface org.bigraphs.framework.core.Signature
getControlByName(String) - Method in interface org.bigraphs.framework.core.Signature: Get the control by its string identifier
getControlKind() - Method in interface org.bigraphs.framework.core.Control: Returns the kind of the control.
getControlKind() - Method in class org.bigraphs.framework.core.impl.signature.BindingControl
getControlKind() - Method in class org.bigraphs.framework.core.impl.signature.DefaultDynamicControl
getControlPortNamePortIndexMapping() - Method in class org.bigraphs.framework.converter.bigred.DefaultSignatureXMLLoader
getControls() - Method in class org.bigraphs.framework.core.AbstractEcoreSignature
getControls() - Method in interface org.bigraphs.framework.core.Signature: Get the controls of the signature.
getControls() - Method in class org.bigraphs.framework.core.SignatureBuilder
getCount() - Method in class org.bigraphs.framework.core.analysis.PureLinkGraphConnectedComponents.UnionFind
getCreatedEdges() - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
getCurrentDepth() - Static method in class GCF.DefaultImpl2.GXLOutputAPI: Returns the current depth of the Abstract Syntax Tree generated by the GCF.GXLConnector.
getCurrentDepth() - Static method in class GCF.DefaultImpl3.GXLOutputAPI: Returns the current depth of the Abstract Syntax Tree generated by the GCF.GXLConnector.
getCurrentDepth() - Static method in class GCF.original.GXLOutputAPI: Returns the current depth of the Abstract Syntax Tree generated by the GCF.GXLConnector.
getCurrentDepth() - Static method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLOutputAPI: Returns the current depth of the Abstract Syntax Tree generated by the GCF.GXLConnector.
getDecomposerClassType() - Method in enum class org.bigraphs.framework.core.analysis.BigraphDecompositionStrategy.DecompositionStrategy
getDecompositionStrategy() - Method in class org.bigraphs.framework.core.analysis.BigraphDecomposer
getDecompositionStrategyType() - Method in interface org.bigraphs.framework.core.analysis.BigraphDecompositionStrategy
getDecompositionStrategyType() - Method in class org.bigraphs.framework.core.analysis.PureLinkGraphConnectedComponents
getDefaultBisimAlgo() - Method in class org.bigraphs.framework.simulation.equivalence.StrongBisimulationMixinImpl
getDirectedGraph() - Method in class org.bigraphs.framework.core.AbstractRankedGraph
getDistributedRandomNumber() - Method in class org.bigraphs.framework.core.utils.DistributedRandomNumberGenerator
getEdges() - Method in interface org.bigraphs.framework.core.Bigraph
getEdges() - Method in class org.bigraphs.framework.core.BigraphBuilderSupport.InstanceParameter
getEdges() - Method in class org.bigraphs.framework.core.BigraphDelegator
getEdges() - Method in class org.bigraphs.framework.core.ElementaryBigraph
getEdges() - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getEdges() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getEdgeToCellMap() - Method in class org.bigraphs.framework.visualization.mxReactionGraph: Returns Hashmap which maps the edges onto their visualization mxICells.
getEmbeddingSet() - Method in class org.bigraphs.framework.simulation.matching.pure.SubHypergraphIsoSearch
getEMetaModelData() - Method in interface org.bigraphs.framework.core.EcoreBigraph: Retrieves the meta model data from the bigraph's EPackage.
getEPackage(Signature) - Method in interface org.bigraphs.framework.core.factory.BigraphFactory.Registry: Looks up the value in the map
getEPackage(Signature) - Method in class org.bigraphs.framework.core.factory.DefaultBigraphModelsRegistryImpl
getEPackage(Signature) - Method in class org.bigraphs.framework.core.factory.DefaultSignatureModelsRegistryImpl
getExceptions() - Method in class org.bigraphs.framework.core.validation.InvalidModelResult
getExportFormat() - Method in class org.bigraphs.framework.converter.ecore.EcoreAgentConverter
getFactory() - Method in class org.bigraphs.framework.core.factory.FactoryCreationContext
getFormatsEnabled() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions
getGraph() - Method in class org.bigraphs.framework.core.AbstractRankedGraph
getGraph() - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph: Get the data structure of the reaction graph
getGraph() - Method in class org.bigraphs.framework.visualization.SwingGraphStreamer: Get the underlying graph object for the visualization with GraphStream
getGraphStats() - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph: Get an object containing some informative statistics of the reaction graph
getGraphViewer() - Method in class org.bigraphs.framework.visualization.SwingGraphStreamer: GraphStream Visualization.
getGraphViewer(String) - Method in class org.bigraphs.framework.visualization.SwingGraphStreamer: GraphStream Visualization
getId() - Method in class org.bigraphs.framework.core.AbstractRankedGraph.LabeledNode: Gets the label associated with this node.
getIdMap() - Method in class org.bigraphs.framework.core.analysis.PureBigraphDecomposerImpl
getIdMap() - Method in class org.bigraphs.framework.core.analysis.PureLinkGraphConnectedComponents: Get the map from BigraphEntity to simple Integer labels.
getImplClassType() - Method in enum class org.bigraphs.framework.core.analysis.BigraphDecompositionStrategy.DecompositionStrategy
getIncidentHyperedges(BigraphEntity.NodeEntity<?>, Bigraph<?>) - Method in class org.bigraphs.framework.simulation.matching.pure.IHSFilter
getIncidentLinksOf(BigraphEntity.NodeEntity<C>) - Method in interface org.bigraphs.framework.core.Bigraph: Returns all incidents links (i.e., edges and outer names) for the given node
getIndex() - Method in class org.bigraphs.framework.core.impl.BigraphEntity.Port
getIndex() - Method in class org.bigraphs.framework.core.impl.BigraphEntity.RootEntity
getIndex() - Method in class org.bigraphs.framework.core.impl.BigraphEntity.SiteEntity
getInitialStateLabels() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem
getInnerFace() - Method in interface org.bigraphs.framework.core.Bigraph
getInnerNames() - Method in interface org.bigraphs.framework.core.Bigraph
getInnerNames() - Method in class org.bigraphs.framework.core.BigraphBuilderSupport.InstanceParameter
getInnerNames() - Method in class org.bigraphs.framework.core.BigraphDelegator
getInnerNames() - Method in class org.bigraphs.framework.core.ElementaryBigraph
getInnerNames() - Method in class org.bigraphs.framework.core.impl.elementary.Linkings.Closure
getInnerNames() - Method in class org.bigraphs.framework.core.impl.elementary.Linkings.Substitution
getInnerNames() - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getInnerNames() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getInputStreamOfInstanceModel() - Method in class org.bigraphs.framework.core.EcoreBigraph.Stub: Return the actual instance model (*.xmi) of the bigraph as an input stream.
getInstance() - Method in class org.bigraphs.framework.core.impl.BigraphEntity
getInstance() - Static method in class org.bigraphs.framework.core.utils.auxiliary.MemoryOperations
getInstanceModel() - Method in class org.bigraphs.framework.core.AbstractEcoreSignature
getInstanceModel() - Method in class org.bigraphs.framework.core.BigraphBuilderSupport
getInstanceModel() - Method in class org.bigraphs.framework.core.EcoreBigraph.Stub
getInstanceModel() - Method in interface org.bigraphs.framework.core.EcoreBigraphExt: Return the Ecore-based instance model of a bigraph object or signature object.
getInstanceModel() - Method in interface org.bigraphs.framework.core.EcoreSignature: Return the respective signature Ecore-based instance model.
getInstanceModel() - Method in class org.bigraphs.framework.core.ElementaryBigraph
getInstanceModel() - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getInstanceModel() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getInstanceModel() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
getInstanceModel() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphComposite
getInstanceModel() - Method in class org.bigraphs.framework.core.impl.signature.BindingSignature
getInstanceModel() - Method in class org.bigraphs.framework.core.impl.signature.DefaultDynamicSignature
getInstanceModel() - Method in class org.bigraphs.framework.core.impl.signature.KindSignature
getInstanceModel() - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter
getInstantationMap() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
getInstantationMap() - Method in interface org.bigraphs.framework.core.reactivesystem.ReactionRule: Return the instantiation map of the parametric reaction rule
getJLibMatchResult() - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphParametricMatch
getKeyForVal(EPackage) - Method in interface org.bigraphs.framework.core.factory.BigraphFactory.Registry
getKindsOfControl() - Method in class org.bigraphs.framework.core.impl.signature.KindSort
getLabel() - Method in class org.bigraphs.framework.core.AbstractRankedGraph.LabeledEdge: Gets the label associated with this edge.
getLabel() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
getLabel() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem.Transition
getLabel() - Method in interface org.bigraphs.framework.core.reactivesystem.HasLabel
getLabel() - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph.LabeledEdge: Gets the label associated with this edge.
getLabel() - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph.LabeledNode
getLabel() - Method in class org.bigraphs.framework.core.reactivesystem.ReactiveSystemPredicate
getLabel() - Method in class org.bigraphs.framework.core.reactivesystem.TransitionTriple
getLabel(BigraphEntity.NodeEntity<?>) - Method in class org.bigraphs.framework.simulation.matching.pure.IHSFilter
getLabelByState(B) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem: This doesnt work with source/target states coming from Transition.
getLabeledNodeByCanonicalForm(String) - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph
getLastCreatedNode() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy
getLevelOf(BigraphEntity<?>) - Method in interface org.bigraphs.framework.core.Bigraph: Get the depth of a place entity in the place graph (i.e., a tree).
getLevelOf(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.BigraphDelegator
getLevelOf(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.ElementaryBigraph
getLevelOf(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getLevelOf(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getLink() - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter.ControlLinkPair
getLinkings() - Method in class org.bigraphs.framework.core.alg.generators.BigridGenerator: Deprecated.
getLinkOfPoint(BigraphEntity<?>) - Method in interface org.bigraphs.framework.core.Bigraph: Returns the link of a bigraph's point type.
getLinkOfPoint(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.BigraphDelegator
getLinkOfPoint(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.ElementaryBigraph
getLinkOfPoint(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getLinkOfPoint(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getLinks() - Method in class org.bigraphs.framework.core.reactivesystem.TrackingMap
getLinksOfNode(BigraphEntity<?>) - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter: Note: Only the port indices are important for the order, not the name itself.
getLinksOfNode(BigraphEntity<?>) - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphAgentAdapter: In the list are included edges and outer names.
getLinksOfNode(BigraphEntity<?>) - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphRedexAdapter: Only outer names are returned, edges are not considered for the result.
getLinkStrategy() - Method in class org.bigraphs.framework.core.alg.generators.RandomBigraphGeneratorSupport
getLoadedModelPackage() - Method in class org.bigraphs.framework.core.impl.elementary.Linkings
getLoadedModelPackage() - Method in class org.bigraphs.framework.core.impl.elementary.Placings
getMappings() - Method in class org.bigraphs.framework.core.reactivesystem.InstantiationMap
getMatch() - Method in interface org.bigraphs.framework.core.reactivesystem.BMatchResult
getMatch() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingStrategySupport.MatchResult
getMatcher() - Method in class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker
getMatches() - Method in interface org.bigraphs.framework.simulation.matching.BigraphMatchingEngine
getMatches() - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphMatchingEngine
getMatchResults() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem.Transition
getMaximumTime() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.TransitionOptions
getMaximumTimeUnit() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.TransitionOptions
getMaximumTransitions() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.TransitionOptions
getMetaModel() - Method in class org.bigraphs.framework.core.AbstractEcoreSignature
getMetaModel() - Method in class org.bigraphs.framework.core.BigraphBuilderSupport
getMetaModel() - Method in class org.bigraphs.framework.core.EcoreBigraph.Stub
getMetaModel() - Method in interface org.bigraphs.framework.core.EcoreBigraphExt: Return the metamodel of a bigraph object or a signature object.
getMetaModel() - Method in interface org.bigraphs.framework.core.EcoreSignature: Return the respective signature Ecore-based metamodel.
getMetaModel() - Method in class org.bigraphs.framework.core.ElementaryBigraph
getMetaModel() - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getMetaModel() - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
getMetaModel() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getMetaModel() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
getMetaModel() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphComposite
getMetaModel() - Method in class org.bigraphs.framework.core.impl.signature.BindingSignature
getMetaModel() - Method in class org.bigraphs.framework.core.impl.signature.DefaultDynamicSignature
getMetaModel() - Method in class org.bigraphs.framework.core.impl.signature.KindSignature
getMetaModel() - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter
getModelClass() - Method in class org.bigraphs.framework.core.validation.ValidModelResult
getModelPackage() - Method in class org.bigraphs.framework.core.alg.generators.PureBigraphGenerator
getModelPackage() - Method in class org.bigraphs.framework.core.BigraphBuilderSupport.InstanceParameter
getName() - Method in class org.bigraphs.framework.core.datatypes.EMetaModelData
getName() - Method in class org.bigraphs.framework.core.impl.BigraphEntity.InnerName
getName() - Method in class org.bigraphs.framework.core.impl.BigraphEntity.Link
getName() - Method in class org.bigraphs.framework.core.impl.BigraphEntity.NodeEntity
getNamedType() - Method in class org.bigraphs.framework.core.AbstractControl
getNamedType() - Method in interface org.bigraphs.framework.core.HasIdentifier
getNode() - Method in class org.bigraphs.framework.visualization.GraphicalFeatureSupplier
getNodeOfPort(BigraphEntity.Port) - Method in interface org.bigraphs.framework.core.Bigraph
getNodeOfPort(BigraphEntity.Port) - Method in class org.bigraphs.framework.core.BigraphDelegator
getNodeOfPort(BigraphEntity.Port) - Method in class org.bigraphs.framework.core.ElementaryBigraph: Always returns null, since elementary bigraphs are node-free bigraphs
getNodeOfPort(BigraphEntity.Port) - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getNodeOfPort(BigraphEntity.Port) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getNodes() - Method in interface org.bigraphs.framework.core.Bigraph
getNodes() - Method in class org.bigraphs.framework.core.BigraphBuilderSupport.InstanceParameter
getNodes() - Method in class org.bigraphs.framework.core.BigraphDelegator
getNodes() - Method in class org.bigraphs.framework.core.ElementaryBigraph
getNodes() - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getNodes() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getNodesOfLink(BigraphEntity.Link) - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter
getNsPrefix() - Method in class org.bigraphs.framework.core.datatypes.EMetaModelData
getNsUri() - Method in class org.bigraphs.framework.core.datatypes.EMetaModelData
getOccurrenceCount() - Method in interface org.bigraphs.framework.core.reactivesystem.BMatchResult
getOccurrenceCount() - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraphStats
getOccurrenceCount() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingStrategySupport.MatchResult
getOfNodesForHyperedgeWithLabel(BigraphEntity.Link, String, Bigraph<?>) - Method in class org.bigraphs.framework.simulation.matching.pure.IHSFilter
getOpenNeighborhoodOfVertex(BigraphEntity<?>) - Method in interface org.bigraphs.framework.core.Bigraph: Gets the neighborhood of the given node of the place graph.
getOpenNeighborhoodOfVertex(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.BigraphDelegator
getOpenNeighborhoodOfVertex(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.ElementaryBigraph
getOpenNeighborhoodOfVertex(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getOpenNeighborhoodOfVertex(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getOpenNeighborhoodOfVertex(BigraphEntity<?>) - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter: This method is used solely for the matching algorithm.
getOuterBigraph() - Method in interface org.bigraphs.framework.core.BigraphComposite: Return the outer bigraph of a composition, that is, the left part of the operator (i.e., outer bigraph).
getOuterBigraph() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphComposite: Function that makes the nodes disjunct in terms of there names.
getOuterFace() - Method in interface org.bigraphs.framework.core.Bigraph
getOuterNames() - Method in interface org.bigraphs.framework.core.Bigraph
getOuterNames() - Method in class org.bigraphs.framework.core.BigraphBuilderSupport.InstanceParameter
getOuterNames() - Method in class org.bigraphs.framework.core.BigraphDelegator
getOuterNames() - Method in class org.bigraphs.framework.core.ElementaryBigraph
getOuterNames() - Method in class org.bigraphs.framework.core.impl.elementary.Linkings.Substitution
getOuterNames() - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getOuterNames() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getOutputStatesFolder() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions
getParam() - Method in interface org.bigraphs.framework.core.reactivesystem.BigraphMatch
getParam() - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphParametricMatch
getParameters() - Method in interface org.bigraphs.framework.core.reactivesystem.BigraphMatch: Get all parameters of the reaction rules as a list
getParameters() - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphParametricMatch
getParent() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy
getParent(BigraphEntity<?>) - Method in interface org.bigraphs.framework.core.Bigraph: Get the parent of a bigraph's place.
getParent(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.BigraphDelegator
getParent(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.ElementaryBigraph
getParent(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Barren: Returns always null since a barren cannot have any child.
getParent(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getParent(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getPartitions() - Method in class org.bigraphs.framework.core.analysis.PureBigraphDecomposerImpl
getPartitions() - Method in class org.bigraphs.framework.core.analysis.PureLinkGraphConnectedComponents: Returns a map of partitions and their entities (which can be nodes and inner names).
getPath() - Method in class org.bigraphs.framework.core.reactivesystem.analysis.ReactionGraphAnalysis.StateTrace
getPlaceKindMap() - Method in class org.bigraphs.framework.core.impl.signature.DefaultDynamicSignature
getPlaceKindMap() - Method in class org.bigraphs.framework.core.impl.signature.KindSignature
getPlaceKindMap() - Method in interface org.bigraphs.framework.core.IsPlaceSortable
getPlacings() - Method in class org.bigraphs.framework.core.alg.generators.BigridGenerator: Deprecated.
getPointsFromLink(BigraphEntity.Link) - Method in interface org.bigraphs.framework.core.Bigraph: Get all point entities (i.e., ports and inner names) of a link entity (i.e., edges and outer names).
getPointsFromLink(BigraphEntity.Link) - Method in class org.bigraphs.framework.core.BigraphDelegator
getPointsFromLink(BigraphEntity.Link) - Method in class org.bigraphs.framework.core.ElementaryBigraph
getPointsFromLink(BigraphEntity.Link) - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getPointsFromLink(BigraphEntity.Link) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getPortCount(BigraphEntity.NodeEntity<C>) - Method in interface org.bigraphs.framework.core.Bigraph: Get the number of "blocked/occupied" ports by links of a node.
getPortCount(BigraphEntity.NodeEntity<C>) - Method in class org.bigraphs.framework.core.BigraphDelegator
getPortCount(BigraphEntity.NodeEntity<C>) - Method in class org.bigraphs.framework.core.ElementaryBigraph
getPortCount(BigraphEntity.NodeEntity<C>) - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getPortCount(BigraphEntity.NodeEntity<C>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getPorts(BigraphEntity<?>) - Method in interface org.bigraphs.framework.core.Bigraph: Return all ports of a node.
getPorts(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.BigraphDelegator
getPorts(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.ElementaryBigraph
getPorts(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getPorts(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph: Return all ports of a node.
getPredicateMap() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem
getPredicateMap() - Method in interface org.bigraphs.framework.core.reactivesystem.ReactiveSystem
getPredicateMatches() - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph
getPredicates() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem
getPredicates() - Method in interface org.bigraphs.framework.core.reactivesystem.ReactiveSystem
getPredicates() - Method in class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker
getPredicates() - Method in class org.bigraphs.framework.simulation.modelchecking.predicates.PredicateChecker: Get the set of predicates with which the class was instantiated.
getPrintCanonicalStateLabel() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions: Flag that can be used to determine whether the labels of the states in the reaction graph should contain the canonical form of a bigraph or not, meaning, only a constant identifier is printed suffixed with an incremented number.
getPriority() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
getPriority() - Method in interface org.bigraphs.framework.core.reactivesystem.HasPriority
getRank() - Method in class org.bigraphs.framework.core.analysis.PureLinkGraphConnectedComponents.UnionFind
getReactionGraph() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem.TransitionSystemBoundSimpleReactiveSystem
getReactionGraph() - Method in class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker
getReactionGraphFile() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions: The file to store the reaction graph (i.e., transition system)
getReactionRule() - Method in interface org.bigraphs.framework.core.reactivesystem.BMatchResult
getReactionRule() - Method in class org.bigraphs.framework.core.reactivesystem.ConditionalParametricRuleDecorator: Returns the underlying reaction rule.
getReactionRule() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingStrategySupport.MatchResult
getReactionRules() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem
getReactionRules() - Method in interface org.bigraphs.framework.core.reactivesystem.ReactiveSystem: Return the labels of the transition system which are called reaction rules for BRS.
getReactionRulesMap() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem
getReactionRulesMap() - Method in interface org.bigraphs.framework.core.reactivesystem.ReactiveSystem
getReactiveSystem() - Method in class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker
getReactum() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
getReactum() - Method in interface org.bigraphs.framework.core.reactivesystem.ReactionRule: Return the reactum of the reaction rule
getRedex() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
getRedex() - Method in interface org.bigraphs.framework.core.reactivesystem.BigraphMatch: Returns the redex of the reaction rule.
getRedex() - Method in interface org.bigraphs.framework.core.reactivesystem.ReactionRule: Return the redex of the reaction rule
getRedex() - Method in class org.bigraphs.framework.simulation.matching.AbstractBigraphMatcher: Returns the supplied redex passed via the AbstractBigraphMatcher.match(Bigraph, ReactionRule) method.
getRedex() - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphParametricMatch
getRedexIdentity() - Method in interface org.bigraphs.framework.core.reactivesystem.BigraphMatch: Get the identity link graph of the redex to build the redex image.
getRedexIdentity() - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphParametricMatch
getRedexImage() - Method in interface org.bigraphs.framework.core.reactivesystem.BigraphMatch: Returns the redex image - the juxtaposition of the redex and a suitable identity.
getRedexImage() - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphParametricMatch
getRewriteResultFolder() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions: Deprecated.
getRootContainer(EObject) - Static method in class org.bigraphs.framework.core.utils.emf.EMFUtils
getRoots() - Method in interface org.bigraphs.framework.core.Bigraph
getRoots() - Method in class org.bigraphs.framework.core.BigraphBuilderSupport.InstanceParameter
getRoots() - Method in class org.bigraphs.framework.core.BigraphDelegator
getRoots() - Method in class org.bigraphs.framework.core.ElementaryBigraph
getRoots() - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Barren
getRoots() - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Join
getRoots() - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Merge
getRoots() - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Permutation
getRoots() - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Symmetry
getRoots() - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getRoots() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getRoots() - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter
getRootsOfPartitions(Map<Integer, Integer>) - Method in class org.bigraphs.framework.core.analysis.PureLinkGraphConnectedComponents.UnionFind
getRule() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule.ReactiveSystemBoundReactionRule
getRuleName() - Method in class org.bigraphs.framework.core.reactivesystem.TrackingMap
getSeparator() - Method in class org.bigraphs.framework.core.reactivesystem.ReactionRuleComposer: Get the "intermediate string" used to separate two rule labels when they are composed.
getSiblingsOfInnerName(BigraphEntity.InnerName) - Method in interface org.bigraphs.framework.core.Bigraph: Returns all siblings of an inner name.
getSiblingsOfInnerName(BigraphEntity.InnerName) - Method in class org.bigraphs.framework.core.BigraphDelegator
getSiblingsOfInnerName(BigraphEntity.InnerName) - Method in class org.bigraphs.framework.core.ElementaryBigraph
getSiblingsOfInnerName(BigraphEntity.InnerName) - Method in class org.bigraphs.framework.core.impl.elementary.Linkings.Closure
getSiblingsOfInnerName(BigraphEntity.InnerName) - Method in class org.bigraphs.framework.core.impl.elementary.Linkings.Identity
getSiblingsOfInnerName(BigraphEntity.InnerName) - Method in class org.bigraphs.framework.core.impl.elementary.Linkings.IdentityEmpty
getSiblingsOfInnerName(BigraphEntity.InnerName) - Method in class org.bigraphs.framework.core.impl.elementary.Linkings.Substitution
getSiblingsOfInnerName(BigraphEntity.InnerName) - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Barren
getSiblingsOfInnerName(BigraphEntity.InnerName) - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Join
getSiblingsOfInnerName(BigraphEntity.InnerName) - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Merge
getSiblingsOfInnerName(BigraphEntity.InnerName) - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Permutation
getSiblingsOfInnerName(BigraphEntity.InnerName) - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getSiblingsOfInnerName(BigraphEntity.InnerName) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getSiblingsOfNode(BigraphEntity<?>) - Method in interface org.bigraphs.framework.core.Bigraph: Returns all siblings of the given node of the current bigraph.
getSiblingsOfNode(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.BigraphDelegator
getSiblingsOfNode(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.ElementaryBigraph
getSiblingsOfNode(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.elementary.Linkings.Closure: Always returns an empty list because a linking has no nodes.
getSiblingsOfNode(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.elementary.Linkings.Substitution: Always returns an empty list because a linking has no nodes.
getSiblingsOfNode(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Barren
getSiblingsOfNode(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Join
getSiblingsOfNode(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Merge
getSiblingsOfNode(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Permutation
getSiblingsOfNode(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getSiblingsOfNode(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getSignature() - Method in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
getSignature() - Method in class org.bigraphs.framework.converter.bigred.DefaultReactionRuleXMLLoader
getSignature() - Method in class org.bigraphs.framework.core.alg.generators.BigridGenerator: Deprecated.

Returns the (probably merged) signature of the bigrid.
getSignature() - Method in interface org.bigraphs.framework.core.Bigraph
getSignature() - Method in class org.bigraphs.framework.core.BigraphBuilderSupport.InstanceParameter
getSignature() - Method in class org.bigraphs.framework.core.BigraphDelegator
getSignature() - Method in interface org.bigraphs.framework.core.EcoreBigraph
getSignature() - Method in class org.bigraphs.framework.core.EcoreBigraph.Stub
getSignature() - Method in interface org.bigraphs.framework.core.HasSignature: Get the corresponding signature of the underlying bigraph
getSignature() - Method in class org.bigraphs.framework.core.impl.elementary.Linkings.Closure
getSignature() - Method in class org.bigraphs.framework.core.impl.elementary.Linkings.Identity
getSignature() - Method in class org.bigraphs.framework.core.impl.elementary.Linkings.IdentityEmpty
getSignature() - Method in class org.bigraphs.framework.core.impl.elementary.Linkings.Substitution
getSignature() - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Barren
getSignature() - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Join
getSignature() - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Merge
getSignature() - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Permutation
getSignature() - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Symmetry
getSignature() - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getSignature() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getSignature() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
getSignature() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem
getSignature() - Method in interface org.bigraphs.framework.core.reactivesystem.ReactiveSystem
getSignature() - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphAgentAdapter
getSignature() - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphRedexAdapter
getSignatureControlPortIndexMapping() - Method in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
getSignatureFromMetaModel(EObject) - Static method in class org.bigraphs.framework.core.BigraphBuilderSupport
getSignatureType() - Method in class org.bigraphs.framework.core.factory.AbstractBigraphFactory
getSignatureType() - Method in interface org.bigraphs.framework.core.factory.BigraphFactoryElement
getSimulationStrategyClass(BigraphModelChecker.SimulationStrategy.Type) - Static method in class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker.SimulationStrategy
getSites() - Method in interface org.bigraphs.framework.core.Bigraph
getSites() - Method in class org.bigraphs.framework.core.BigraphBuilderSupport.InstanceParameter
getSites() - Method in class org.bigraphs.framework.core.BigraphDelegator
getSites() - Method in class org.bigraphs.framework.core.ElementaryBigraph
getSites() - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Barren
getSites() - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Join
getSites() - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Merge
getSites() - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Permutation
getSites() - Method in class org.bigraphs.framework.core.impl.elementary.Placings.Symmetry
getSites() - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getSites() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getSource() - Method in class org.bigraphs.framework.core.AbstractRankedGraph.LabeledEdge
getSource() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem.Transition
getSource() - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph.LabeledEdge
getSource() - Method in class org.bigraphs.framework.core.reactivesystem.TransitionTriple
getStateByLabel(String) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem
getStateCount() - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraphStats
getStateLabels() - Method in class org.bigraphs.framework.core.reactivesystem.analysis.ReactionGraphAnalysis.StateTrace
getStateMap() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem: Get the actual bigraph by querying the string label of a state.
getStates() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem
getStatesWithoutFinalStates() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem
getStats() - Method in class org.bigraphs.framework.core.alg.generators.RandomBigraphGeneratorSupport
getSubBigraphFrom(BigraphEntity<?>, AbstractDynamicMatchAdapter) - Method in class org.bigraphs.framework.simulation.matching.BigraphMatchingSupport
getSubBigraphParamResult() - Method in class org.bigraphs.framework.simulation.modelchecking.predicates.SubBigraphMatchPredicate
getSubBigraphResult() - Method in class org.bigraphs.framework.simulation.modelchecking.predicates.SubBigraphMatchPredicate
getSubRedexResult() - Method in class org.bigraphs.framework.simulation.modelchecking.predicates.SubBigraphMatchPredicate
getSubtreeOfNode(BigraphEntity<?>) - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter
getSupport() - Method in interface org.bigraphs.framework.core.Bigraph: Returns the support of a bigraph.
getTarget() - Method in class org.bigraphs.framework.core.AbstractRankedGraph.LabeledEdge
getTarget() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem.Transition
getTarget() - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph.LabeledEdge
getTarget() - Method in class org.bigraphs.framework.core.reactivesystem.TransitionTriple
getTopLevelRoot(BigraphEntity) - Method in class org.bigraphs.framework.core.ElementaryBigraph
getTopLevelRoot(BigraphEntity<?>) - Method in interface org.bigraphs.framework.core.Bigraph
getTopLevelRoot(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.BigraphDelegator
getTopLevelRoot(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
getTopLevelRoot(BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
getTrackingMap() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
getTrackingMap() - Method in interface org.bigraphs.framework.core.reactivesystem.ReactionRule: Returns the tracking map if one was specified for the rule.
getTransitionCount() - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraphStats
getTransitionMap() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem: Get the actual redex of a rule by querying the string label of a transition.
getTransitionOwner() - Method in class org.bigraphs.framework.core.reactivesystem.TransitionTriple
getTransitionRelations() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem
getTransitions(B) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem: This methods returns all transitions from a state Thus, it gets all possible next states (represented as AbstractTransitionSystem<B,T>.Transition) that can be reached from the given state.
getType() - Method in class org.bigraphs.framework.core.AbstractRankedGraph.LabeledNode
getType() - Method in class org.bigraphs.framework.core.ControlBuilder
getType() - Method in class org.bigraphs.framework.core.impl.BigraphEntity
getType() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions
getType() - Method in interface org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.Opts
getType() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.TransitionOptions
getUnionFindDataStructure() - Method in class org.bigraphs.framework.core.analysis.PureBigraphDecomposerImpl: Delegate method.
getUnionFindDataStructure() - Method in class org.bigraphs.framework.core.analysis.PureLinkGraphConnectedComponents: Returns the abstract data structure to solve the Union-Find problem.
getUniqueIdOfBigraphEntity(BigraphEntity) - Static method in class org.bigraphs.framework.core.utils.BigraphUtil: Returns the unique id of an bigraph entity (a node, root, outer name, ...).
getUniqueLabelOfBigraphEntity(BigraphEntity) - Static method in class org.bigraphs.framework.core.utils.BigraphUtil: Returns the common label of an bigraph entity (a node, root, outer name, ...).
getValue() - Method in class org.bigraphs.framework.core.datatypes.FiniteOrdinal
getValue() - Method in interface org.bigraphs.framework.core.datatypes.NamedType
getValue() - Method in class org.bigraphs.framework.core.datatypes.StringTypedName
getVertexToCellMap() - Method in class org.bigraphs.framework.visualization.mxReactionGraph: Returns Hashmap which maps the vertices onto their visualization mxICells.
getViewer() - Method in class org.bigraphs.framework.visualization.SwingGraphStreamer
getXmlFile() - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
graph - Variable in class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder
graph - Variable in class org.bigraphs.framework.core.AbstractRankedGraph
graph - Variable in class org.bigraphs.framework.core.reactivesystem.ReactionGraph
GraphicalFeatureSupplier<V> - Class in org.bigraphs.framework.visualization: Base abstract supplier class for all graphical attributes of a Graphviz graph.
GraphicalFeatureSupplier(BigraphEntity) - Constructor for class org.bigraphs.framework.visualization.GraphicalFeatureSupplier
GraphicalFeatureSupplier(BigraphEntity, char) - Constructor for class org.bigraphs.framework.visualization.GraphicalFeatureSupplier
GraphMLDomBuilder - Class in org.bigraphs.framework.converter.graphml: Utility class for converting bigraph objects into a GraphML document.
GraphMLDomBuilder() - Constructor for class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder
graphMLRoot - Variable in class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder
GraphvizColorSupplier - Class in org.bigraphs.framework.visualization.supplier
GraphvizColorSupplier() - Constructor for class org.bigraphs.framework.visualization.supplier.GraphvizColorSupplier
GraphvizProcess - Class in org.bigraphs.framework.visualization.auxiliary: Converts a Graphviz DOT file to a PNG file by calling the dot process directly.
GraphvizProcess() - Constructor for class org.bigraphs.framework.visualization.auxiliary.GraphvizProcess
GraphvizShapeSupplier - Class in org.bigraphs.framework.visualization.supplier
GraphvizShapeSupplier() - Constructor for class org.bigraphs.framework.visualization.supplier.GraphvizShapeSupplier
GroundReactionRule>> - Class in org.bigraphs.framework.core.reactivesystem: Concrete implementation of a ground reaction rule.
GroundReactionRule(B, B) - Constructor for class org.bigraphs.framework.core.reactivesystem.GroundReactionRule
GXLAttrAPIImpl - Class in GCF.DefaultImpl2: An abstract class to represent the attr-Construct of the GXL-DTD.
GXLAttrAPIImpl - Class in GCF.DefaultImpl3: An abstract class to represent the attr-Construct of the GXL-DTD.
GXLAttrAPIImpl - Class in GCF.original: An abstract class to represent the attr-Construct of the GXL-DTD.
GXLAttrAPIImpl - Class in org.bigraphs.framework.converter.gcf.DefaultImpl1: An abstract class to represent the attr-Construct of the GXL-DTD.
GXLAttrAPIImpl() - Constructor for class GCF.DefaultImpl2.GXLAttrAPIImpl: Empty constructor
GXLAttrAPIImpl() - Constructor for class GCF.DefaultImpl3.GXLAttrAPIImpl: Empty constructor
GXLAttrAPIImpl() - Constructor for class GCF.original.GXLAttrAPIImpl: Empty constructor
GXLAttrAPIImpl() - Constructor for class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Empty constructor
GXLAttributedAPI - Class in GCF.DefaultImpl2: Abstract class to provide the create-and close-methods for any GXL-construct that is attributed.
GXLAttributedAPI - Class in GCF.DefaultImpl3: Abstract class to provide the create-and close-methods for any GXL-construct that is attributed.
GXLAttributedAPI - Class in GCF.original: Abstract class to provide the create-and close-methods for any GXL-construct that is attributed.
GXLAttributedAPI - Class in org.bigraphs.framework.converter.gcf.DefaultImpl1: Abstract class to provide the create-and close-methods for any GXL-construct that is attributed.
GXLAttributedAPI() - Constructor for class GCF.DefaultImpl2.GXLAttributedAPI: Empty constructor.
GXLAttributedAPI() - Constructor for class GCF.DefaultImpl3.GXLAttributedAPI: Empty constructor.
GXLAttributedAPI() - Constructor for class GCF.original.GXLAttributedAPI: Empty constructor.
GXLAttributedAPI() - Constructor for class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttributedAPI: Empty constructor.
GXLBagAPIImpl - Class in GCF.DefaultImpl2: An abstract class to represent the bag-Construct of the GXL-DTD.
GXLBagAPIImpl - Class in GCF.DefaultImpl3: An abstract class to represent the bag-Construct of the GXL-DTD.
GXLBagAPIImpl - Class in GCF.original: An abstract class to represent the bag-Construct of the GXL-DTD.
GXLBagAPIImpl - Class in org.bigraphs.framework.converter.gcf.DefaultImpl1: An abstract class to represent the bag-Construct of the GXL-DTD.
GXLBagAPIImpl() - Constructor for class GCF.DefaultImpl2.GXLBagAPIImpl: Empty constructor.
GXLBagAPIImpl() - Constructor for class GCF.DefaultImpl3.GXLBagAPIImpl: Empty constructor.
GXLBagAPIImpl() - Constructor for class GCF.original.GXLBagAPIImpl: Empty constructor.
GXLBagAPIImpl() - Constructor for class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLBagAPIImpl: Empty constructor.
GXLEdgeAPIImpl - Class in GCF.DefaultImpl2: An abstract class to represent the edge-Construct of the GXL-DTD.
GXLEdgeAPIImpl - Class in GCF.DefaultImpl3: An abstract class to represent the edge-Construct of the GXL-DTD.
GXLEdgeAPIImpl - Class in GCF.original: An abstract class to represent the edge-Construct of the GXL-DTD.
GXLEdgeAPIImpl - Class in org.bigraphs.framework.converter.gcf.DefaultImpl1: An abstract class to represent the edge-Construct of the GXL-DTD.
GXLEdgeAPIImpl() - Constructor for class GCF.DefaultImpl2.GXLEdgeAPIImpl: Empty constructor.
GXLEdgeAPIImpl() - Constructor for class GCF.DefaultImpl3.GXLEdgeAPIImpl: Empty constructor.
GXLEdgeAPIImpl() - Constructor for class GCF.original.GXLEdgeAPIImpl: Empty constructor
GXLEdgeAPIImpl() - Constructor for class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLEdgeAPIImpl: Empty constructor
GXLGraphAPIImpl - Class in GCF.DefaultImpl2: An abstract class to represent the graph-Construct of the GXL-DTD.
GXLGraphAPIImpl - Class in GCF.DefaultImpl3: An abstract class to represent the graph-Construct of the GXL-DTD.
GXLGraphAPIImpl - Class in GCF.original: An abstract class to represent the graph-Construct of the GXL-DTD.
GXLGraphAPIImpl - Class in org.bigraphs.framework.converter.gcf.DefaultImpl1: An abstract class to represent the graph-Construct of the GXL-DTD.
GXLGraphAPIImpl() - Constructor for class GCF.DefaultImpl2.GXLGraphAPIImpl: Empty constructor.
GXLGraphAPIImpl() - Constructor for class GCF.DefaultImpl3.GXLGraphAPIImpl: Empty constructor.
GXLGraphAPIImpl() - Constructor for class GCF.original.GXLGraphAPIImpl: Empty constructor.
GXLGraphAPIImpl() - Constructor for class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLGraphAPIImpl: Empty constructor.
GXLGraphContainerAPI - Class in GCF.DefaultImpl2: Abstract class to provide the create-and close-methods for any GXL-construct that is a graph-container.
GXLGraphContainerAPI - Class in GCF.DefaultImpl3: Abstract class to provide the create-and close-methods for any GXL-construct that is a graph-container.
GXLGraphContainerAPI - Class in GCF.original: Abstract class to provide the create-and close-methods for any GXL-construct that is a graph-container.
GXLGraphContainerAPI - Class in org.bigraphs.framework.converter.gcf.DefaultImpl1: Abstract class to provide the create-and close-methods for any GXL-construct that is a graph-container.
GXLGraphContainerAPI() - Constructor for class GCF.DefaultImpl2.GXLGraphContainerAPI: Empty constructor.
GXLGraphContainerAPI() - Constructor for class GCF.DefaultImpl3.GXLGraphContainerAPI: Empty constructor.
GXLGraphContainerAPI() - Constructor for class GCF.original.GXLGraphContainerAPI: Empty constructor.
GXLGraphContainerAPI() - Constructor for class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLGraphContainerAPI: Empty constructor.
GXLGXLAPIImpl - Class in GCF.DefaultImpl2: An abstract class to represent the gxl-Construct of the GXL-DTD.
GXLGXLAPIImpl - Class in GCF.DefaultImpl3: An abstract class to represent the gxl-Construct of the GXL-DTD.
GXLGXLAPIImpl - Class in GCF.original: An abstract class to represent the gxl-Construct of the GXL-DTD.
GXLGXLAPIImpl - Class in org.bigraphs.framework.converter.gcf.DefaultImpl1: An abstract class to represent the gxl-Construct of the GXL-DTD.
GXLGXLAPIImpl() - Constructor for class GCF.DefaultImpl2.GXLGXLAPIImpl: Empty constructor.
GXLGXLAPIImpl() - Constructor for class GCF.DefaultImpl3.GXLGXLAPIImpl: Empty constructor.
GXLGXLAPIImpl() - Constructor for class GCF.original.GXLGXLAPIImpl: Empty constructor.
GXLGXLAPIImpl() - Constructor for class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLGXLAPIImpl: Empty constructor.
GXLLocatorAPIImpl - Class in GCF.DefaultImpl2: An abstract class to represent the locator-Construct of the GXL-DTD.
GXLLocatorAPIImpl - Class in GCF.DefaultImpl3: An abstract class to represent the locator-Construct of the GXL-DTD.
GXLLocatorAPIImpl - Class in GCF.original: An abstract class to represent the locator-Construct of the GXL-DTD.
GXLLocatorAPIImpl - Class in org.bigraphs.framework.converter.gcf.DefaultImpl1: An abstract class to represent the locator-Construct of the GXL-DTD.
GXLLocatorAPIImpl() - Constructor for class GCF.DefaultImpl2.GXLLocatorAPIImpl: Empty constructor.
GXLLocatorAPIImpl() - Constructor for class GCF.DefaultImpl3.GXLLocatorAPIImpl: Empty constructor.
GXLLocatorAPIImpl() - Constructor for class GCF.original.GXLLocatorAPIImpl: Empty constructor.
GXLLocatorAPIImpl() - Constructor for class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLLocatorAPIImpl: Empty constructor.
GXLNodeAPIImpl - Class in GCF.DefaultImpl2: An abstract class to represent the node-Construct of the GXL-DTD.
GXLNodeAPIImpl - Class in GCF.DefaultImpl3: An abstract class to represent the node-Construct of the GXL-DTD.
GXLNodeAPIImpl - Class in GCF.original: An abstract class to represent the node-Construct of the GXL-DTD.
GXLNodeAPIImpl - Class in org.bigraphs.framework.converter.gcf.DefaultImpl1: An abstract class to represent the node-Construct of the GXL-DTD.
GXLNodeAPIImpl() - Constructor for class GCF.DefaultImpl2.GXLNodeAPIImpl: Empty constructor.
GXLNodeAPIImpl() - Constructor for class GCF.DefaultImpl3.GXLNodeAPIImpl: Empty constructor.
GXLNodeAPIImpl() - Constructor for class GCF.original.GXLNodeAPIImpl: Empty constructor.
GXLNodeAPIImpl() - Constructor for class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLNodeAPIImpl: Empty constructor.
GXLOutputAPI - Class in GCF.DefaultImpl2: This class is to centralize the output-management of the framework.
GXLOutputAPI - Class in GCF.DefaultImpl3: This class is to centralize the output-management of the framework.
GXLOutputAPI - Class in GCF.original: This class is to centralize the output-management of the framework.
GXLOutputAPI - Class in org.bigraphs.framework.converter.gcf.DefaultImpl1: This class is to centralize the output-management of the framework.
GXLOutputAPI() - Constructor for class GCF.DefaultImpl2.GXLOutputAPI: Creates new GXLOutputAPI
GXLOutputAPI() - Constructor for class GCF.DefaultImpl3.GXLOutputAPI: Creates new GXLOutputAPI
GXLOutputAPI() - Constructor for class GCF.original.GXLOutputAPI: Creates new GXLOutputAPI
GXLOutputAPI() - Constructor for class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLOutputAPI: Creates new GXLOutputAPI
GXLRelAPIImpl - Class in GCF.DefaultImpl2: An abstract class to represent the rel-Construct of the GXL-DTD.
GXLRelAPIImpl - Class in GCF.DefaultImpl3: An abstract class to represent the rel-Construct of the GXL-DTD.
GXLRelAPIImpl - Class in GCF.original: An abstract class to represent the rel-Construct of the GXL-DTD.
GXLRelAPIImpl - Class in org.bigraphs.framework.converter.gcf.DefaultImpl1: An abstract class to represent the rel-Construct of the GXL-DTD.
GXLRelAPIImpl() - Constructor for class GCF.DefaultImpl2.GXLRelAPIImpl: Empty constructor.
GXLRelAPIImpl() - Constructor for class GCF.DefaultImpl3.GXLRelAPIImpl: Empty constructor.
GXLRelAPIImpl() - Constructor for class GCF.original.GXLRelAPIImpl: Empty constructor.
GXLRelAPIImpl() - Constructor for class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLRelAPIImpl: Empty constructor.
GXLRelendAPIImpl - Class in GCF.DefaultImpl2: An abstract class to represent the relend-Construct of the GXL-DTD.
GXLRelendAPIImpl - Class in GCF.DefaultImpl3: An abstract class to represent the relend-Construct of the GXL-DTD.
GXLRelendAPIImpl - Class in GCF.original: An abstract class to represent the relend-Construct of the GXL-DTD.
GXLRelendAPIImpl - Class in org.bigraphs.framework.converter.gcf.DefaultImpl1: An abstract class to represent the relend-Construct of the GXL-DTD.
GXLRelendAPIImpl() - Constructor for class GCF.DefaultImpl2.GXLRelendAPIImpl: Empty constructor.
GXLRelendAPIImpl() - Constructor for class GCF.DefaultImpl3.GXLRelendAPIImpl: Empty constructor.
GXLRelendAPIImpl() - Constructor for class GCF.original.GXLRelendAPIImpl: Empty constructor.
GXLRelendAPIImpl() - Constructor for class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLRelendAPIImpl: Empty constructor.
GXLSeqAPIImpl - Class in GCF.DefaultImpl2: An abstract class to represent the seq-Construct of the GXL-DTD.
GXLSeqAPIImpl - Class in GCF.DefaultImpl3: An abstract class to represent the seq-Construct of the GXL-DTD.
GXLSeqAPIImpl - Class in GCF.original: An abstract class to represent the seq-Construct of the GXL-DTD.
GXLSeqAPIImpl - Class in org.bigraphs.framework.converter.gcf.DefaultImpl1: An abstract class to represent the seq-Construct of the GXL-DTD.
GXLSeqAPIImpl() - Constructor for class GCF.DefaultImpl2.GXLSeqAPIImpl: Empty constructor.
GXLSeqAPIImpl() - Constructor for class GCF.DefaultImpl3.GXLSeqAPIImpl: Empty constructor.
GXLSeqAPIImpl() - Constructor for class GCF.original.GXLSeqAPIImpl: Empty constructor.
GXLSeqAPIImpl() - Constructor for class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLSeqAPIImpl: Empty constructor.
GXLSetAPIImpl - Class in GCF.DefaultImpl2: An abstract class to represent the set-Construct of the GXL-DTD.
GXLSetAPIImpl - Class in GCF.DefaultImpl3: An abstract class to represent the set-Construct of the GXL-DTD.
GXLSetAPIImpl - Class in GCF.original: An abstract class to represent the set-Construct of the GXL-DTD.
GXLSetAPIImpl - Class in org.bigraphs.framework.converter.gcf.DefaultImpl1: An abstract class to represent the set-Construct of the GXL-DTD.
GXLSetAPIImpl() - Constructor for class GCF.DefaultImpl2.GXLSetAPIImpl: Empty constructor.
GXLSetAPIImpl() - Constructor for class GCF.DefaultImpl3.GXLSetAPIImpl: Empty constructor.
GXLSetAPIImpl() - Constructor for class GCF.original.GXLSetAPIImpl: Empty constructor.
GXLSetAPIImpl() - Constructor for class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLSetAPIImpl: Empty constructor.
GXLStandardAPI - Class in GCF.DefaultImpl2: Abstract class to provide the setAttributeValue() and close()-method for any GXL-construct except the atomic Values.
GXLStandardAPI - Class in GCF.DefaultImpl3: Abstract class to provide the setAttributeValue() and close()-method for any GXL-construct except the atomic Values.
GXLStandardAPI - Class in GCF.original: Abstract class to provide the setAttributeValue() and close()-method for any GXL-construct except the atomic Values.
GXLStandardAPI - Class in org.bigraphs.framework.converter.gcf.DefaultImpl1: Abstract class to provide the setAttributeValue() and close()-method for any GXL-construct except the atomic Values.
GXLStandardAPI() - Constructor for class GCF.DefaultImpl2.GXLStandardAPI: Empty constructor.
GXLStandardAPI() - Constructor for class GCF.DefaultImpl3.GXLStandardAPI: Empty constructor.
GXLStandardAPI() - Constructor for class GCF.original.GXLStandardAPI: Empty constructor.
GXLStandardAPI() - Constructor for class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardAPI: Empty constructor.
GXLStandardValueMethods - Interface in GCF.DefaultImpl2: Interface to define the create-and close-methods and the printData-method for the standard values.
GXLStandardValueMethods - Interface in GCF.DefaultImpl3: Interface to define the create-and close-methods and the printData-method for the standard values.
GXLStandardValueMethods - Interface in GCF.original: Interface to define the create-and close-methods and the printData-method for the standard values.
GXLStandardValueMethods - Interface in org.bigraphs.framework.converter.gcf.DefaultImpl1: Interface to define the create-and close-methods and the printData-method for the standard values.
GXLTupAPIImpl - Class in GCF.DefaultImpl2: An abstract class to represent the tup-Construct of the GXL-DTD.
GXLTupAPIImpl - Class in GCF.DefaultImpl3: An abstract class to represent the tup-Construct of the GXL-DTD.
GXLTupAPIImpl - Class in GCF.original: An abstract class to represent the tup-Construct of the GXL-DTD.
GXLTupAPIImpl - Class in org.bigraphs.framework.converter.gcf.DefaultImpl1: An abstract class to represent the tup-Construct of the GXL-DTD.
GXLTupAPIImpl() - Constructor for class GCF.DefaultImpl2.GXLTupAPIImpl: Empty constructor.
GXLTupAPIImpl() - Constructor for class GCF.DefaultImpl3.GXLTupAPIImpl: Empty constructor.
GXLTupAPIImpl() - Constructor for class GCF.original.GXLTupAPIImpl: Empty constructor.
GXLTupAPIImpl() - Constructor for class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLTupAPIImpl: Empty constructor.
GXLTypeAPIImpl - Class in GCF.DefaultImpl2: An abstract class to represent the type-Construct of the GXL-DTD.
GXLTypeAPIImpl - Class in GCF.DefaultImpl3: An abstract class to represent the type-Construct of the GXL-DTD.
GXLTypeAPIImpl - Class in GCF.original: An abstract class to represent the type-Construct of the GXL-DTD.
GXLTypeAPIImpl - Class in org.bigraphs.framework.converter.gcf.DefaultImpl1: An abstract class to represent the type-Construct of the GXL-DTD.
GXLTypeAPIImpl() - Constructor for class GCF.DefaultImpl2.GXLTypeAPIImpl: Empty constructor.
GXLTypeAPIImpl() - Constructor for class GCF.DefaultImpl3.GXLTypeAPIImpl: Empty constructor.
GXLTypeAPIImpl() - Constructor for class GCF.original.GXLTypeAPIImpl: Empty constructor.
GXLTypeAPIImpl() - Constructor for class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLTypeAPIImpl: Empty constructor.
GXLTypedAndAttributedAPI - Class in GCF.DefaultImpl2: Abstract class to provide the create-and close-methods for any GXL-construct that is typed and attributed.
GXLTypedAndAttributedAPI - Class in GCF.DefaultImpl3: Abstract class to provide the create-and close-methods for any GXL-construct that is typed and attributed.
GXLTypedAndAttributedAPI - Class in GCF.original: Abstract class to provide the create-and close-methods for any GXL-construct that is typed and attributed.
GXLTypedAndAttributedAPI - Class in org.bigraphs.framework.converter.gcf.DefaultImpl1: Abstract class to provide the create-and close-methods for any GXL-construct that is typed and attributed.
GXLTypedAndAttributedAPI() - Constructor for class GCF.DefaultImpl2.GXLTypedAndAttributedAPI: Empty constructor.
GXLTypedAndAttributedAPI() - Constructor for class GCF.DefaultImpl3.GXLTypedAndAttributedAPI: Empty constructor.
GXLTypedAndAttributedAPI() - Constructor for class GCF.original.GXLTypedAndAttributedAPI: Empty constructor.
GXLTypedAndAttributedAPI() - Constructor for class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLTypedAndAttributedAPI: Empty constructor.
GXLUntypedStandardValueContainerAPI - Class in GCF.DefaultImpl2: Abstract class to provide the printData()-method and the create()-and close() methods for any GXL-construct that is an untyped standard-value-container (e.g.
GXLUntypedStandardValueContainerAPI - Class in GCF.DefaultImpl3: Abstract class to provide the printData()-method and the create()-and close() methods for any GXL-construct that is an untyped standard-value-container (e.g.
GXLUntypedStandardValueContainerAPI - Class in GCF.original: Abstract class to provide the printData()-method and the create()-and close() methods for any GXL-construct that is an untyped standard-value-container (e.g.
GXLUntypedStandardValueContainerAPI - Class in org.bigraphs.framework.converter.gcf.DefaultImpl1: Abstract class to provide the printData()-method and the create()-and close() methods for any GXL-construct that is an untyped standard-value-container (e.g.
GXLUntypedStandardValueContainerAPI() - Constructor for class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Empty constructor.
GXLUntypedStandardValueContainerAPI() - Constructor for class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Empty constructor.
GXLUntypedStandardValueContainerAPI() - Constructor for class GCF.original.GXLUntypedStandardValueContainerAPI: Empty constructor.
GXLUntypedStandardValueContainerAPI() - Constructor for class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Empty constructor.

H

hasChildNodes(BigraphEntity) - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
hash(B) - Method in interface org.bigraphs.framework.simulation.encoding.hash.BigraphHashFunction: Compute a hash for a given bigraph.
hash(PureBigraph) - Method in class org.bigraphs.framework.simulation.encoding.hash.PureBigraphHash: Computes a "hash" for a pure bigraph by only considering the number of places, edges, inner and outer names.
hashCode() - Method in class org.bigraphs.framework.core.AbstractControl
hashCode() - Method in class org.bigraphs.framework.core.AbstractEcoreSignature
hashCode() - Method in class org.bigraphs.framework.core.datatypes.FiniteOrdinal
hashCode() - Method in class org.bigraphs.framework.core.datatypes.StringTypedName
hashCode() - Method in class org.bigraphs.framework.core.impl.BigraphEntity
hashCode() - Method in class org.bigraphs.framework.core.impl.signature.DefaultDynamicControl
hashCode() - Method in class org.bigraphs.framework.core.impl.signature.KindSignature
hashCode() - Method in class org.bigraphs.framework.core.impl.signature.KindSort
hashCode() - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph.CanonicalLabeledNode
hashCode() - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph.DefaultLabeledNode
hashCode() - Method in class org.bigraphs.framework.core.reactivesystem.TrackingMap
hashCode() - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter.ControlLinkPair
HasIdentifier<NT extends NamedType> - Interface in org.bigraphs.framework.core: Interface for entities that have an identifier, meaning, they can be labelled.
hasIdleOuterNames(B) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem
HasLabel - Interface in org.bigraphs.framework.core.reactivesystem: Marker interface that indicates the object has a label.
hasMatched() - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphMatchingEngine: Checks if any match could be found and also if _all_ redex roots could be matched.
hasNext() - Method in class org.bigraphs.framework.simulation.matching.pure.PureMatchIteratorImpl
hasOutputStatesFolder() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions
HasPriority - Interface in org.bigraphs.framework.core.reactivesystem: Marker interface that indicates the object has a label.
hasReactionGraphFile() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions: Checks if the filename for the reaction graph export was set.
hasRewriteResultFolder() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions: Deprecated.
HasSignature<S extends Signature<?>> - Interface in org.bigraphs.framework.core
hierarchy(String) - Method in interface org.bigraphs.framework.core.BigraphBuilder
hierarchy(String) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
hierarchy(Control) - Method in interface org.bigraphs.framework.core.BigraphBuilder
hierarchy(Control) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Creates a new independent hierarchy which can be added later.
hypergraph - Variable in class GCF.DefaultImpl2.GXLGraphAPIImpl

I

id - Variable in class GCF.DefaultImpl2.GXLAttrAPIImpl
id - Variable in class GCF.DefaultImpl2.GXLEdgeAPIImpl
id - Variable in class GCF.DefaultImpl2.GXLGraphAPIImpl
id - Variable in class GCF.DefaultImpl2.GXLNodeAPIImpl
id - Variable in class GCF.DefaultImpl2.GXLRelAPIImpl
identifier(String) - Method in class org.bigraphs.framework.core.impl.signature.DynamicControlBuilder
identifier(String) - Method in class org.bigraphs.framework.core.impl.signature.KindControlBuilder
identifier(NT) - Method in class org.bigraphs.framework.core.ControlBuilder
identity(String) - Method in class org.bigraphs.framework.core.impl.elementary.Linkings
identity(String...) - Method in class org.bigraphs.framework.core.impl.elementary.Linkings
identity(NamedType<?>) - Method in class org.bigraphs.framework.core.impl.elementary.Linkings
identity(NamedType<?>...) - Method in class org.bigraphs.framework.core.impl.elementary.Linkings: Creates an identity link graph from a given name set.
identity_e() - Method in class org.bigraphs.framework.core.impl.elementary.Linkings: Constructs an empty "identity" link graph.
identity1() - Method in class org.bigraphs.framework.core.impl.elementary.Placings
IHSFilter - Class in org.bigraphs.framework.simulation.matching.pure
IHSFilter(Bigraph<?>, Bigraph<?>) - Constructor for class org.bigraphs.framework.simulation.matching.pure.IHSFilter
importObject() - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
importObject() - Method in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
importObject() - Method in class org.bigraphs.framework.converter.bigred.DefaultReactionRuleXMLLoader: Return the reaction rule object after calling DefaultReactionRuleXMLLoader.readXml(String)
importObject() - Method in class org.bigraphs.framework.converter.bigred.DefaultSignatureXMLLoader
importObject() - Method in class org.bigraphs.framework.converter.bigred.DefaultSimulationSpecXMLLoader
IncompatibleInterfaceException - Exception in org.bigraphs.framework.core.exceptions.operations
IncompatibleInterfaceException() - Constructor for exception org.bigraphs.framework.core.exceptions.operations.IncompatibleInterfaceException
IncompatibleInterfaceException(String) - Constructor for exception org.bigraphs.framework.core.exceptions.operations.IncompatibleInterfaceException
IncompatibleSignatureException - Exception in org.bigraphs.framework.core.exceptions
IncompatibleSignatureException() - Constructor for exception org.bigraphs.framework.core.exceptions.IncompatibleSignatureException
increaseOccurrenceCounter() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingStrategySupport
init() - Method in class org.bigraphs.framework.converter.rankedgraph.PureBigraphRankedGraphEncoding
init() - Method in class org.bigraphs.framework.core.AbstractRankedGraph
init() - Method in class org.bigraphs.framework.simulation.matching.pure.SubHypergraphIsoSearch
initControls() - Method in class org.bigraph.model.SignatureAdapter
initGraph(String) - Method in class org.bigraphs.framework.visualization.SwingGraphStreamer
initialAgent - Variable in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem
initialStateLabels - Variable in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem
initKindFunction(Collection<KindSort>) - Method in class org.bigraphs.framework.core.impl.signature.KindSignature
initProcessFromAST() - Method in class org.bigraphs.framework.simulation.equivalence.adapter.BighuggiesBisimulationProcessAdapter: Creates the structure of the Process (transition system) from the given AST.
initViewer() - Method in class org.bigraphs.framework.visualization.SwingGraphStreamer
INNER_NAME - Enum constant in enum class org.bigraphs.framework.core.BigraphEntityType
InnerNameConnectedToEdgeException - Exception in org.bigraphs.framework.core.exceptions.builder: When the user is trying to connect an inner name to an outer name where the inner name is already connected to an edge which connects nodes or other inner names.
InnerNameConnectedToEdgeException() - Constructor for exception org.bigraphs.framework.core.exceptions.builder.InnerNameConnectedToEdgeException
InnerNameConnectedToOuterNameException - Exception in org.bigraphs.framework.core.exceptions.builder
InnerNameConnectedToOuterNameException() - Constructor for exception org.bigraphs.framework.core.exceptions.builder.InnerNameConnectedToOuterNameException
InnerNameNotExistsException - Exception in org.bigraphs.framework.core.exceptions.builder
InnerNameNotExistsException() - Constructor for exception org.bigraphs.framework.core.exceptions.builder.InnerNameNotExistsException
InOrderReactionRuleSupplier>> - Class in org.bigraphs.framework.simulation.modelchecking.reactions: Specific implementation of the AbstractReactionRuleSupplier.
INSTANCE_BIG - Static variable in interface org.bigraphs.framework.core.factory.BigraphFactory.Registry
INSTANCE_SIG - Static variable in interface org.bigraphs.framework.core.factory.BigraphFactory.Registry
instanceModel - Variable in class org.bigraphs.framework.core.AbstractEcoreSignature
instanceModel - Variable in class org.bigraphs.framework.core.ElementaryBigraph
InstanceParameter(EPackage, EObject, S, Map<Integer, BigraphEntity.RootEntity>, Map<Integer, BigraphEntity.SiteEntity>, Map<String, BigraphEntity.NodeEntity>, Map<String, BigraphEntity.InnerName>, Map<String, BigraphEntity.OuterName>, Map<String, BigraphEntity.Edge>) - Constructor for class org.bigraphs.framework.core.BigraphBuilderSupport.InstanceParameter
InstanceParameter(EPackage, S, Map<Integer, BigraphEntity.RootEntity>, Map<Integer, BigraphEntity.SiteEntity>, Map<String, BigraphEntity.NodeEntity>, Map<String, BigraphEntity.InnerName>, Map<String, BigraphEntity.OuterName>, Map<String, BigraphEntity.Edge>) - Constructor for class org.bigraphs.framework.core.BigraphBuilderSupport.InstanceParameter
instantiateEngine() - Method in class org.bigraphs.framework.simulation.matching.AbstractBigraphMatcher: Provide the matching engine for the specific bigraph type implemented by the sub class
instantiateEngine() - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphMatcher
instantiateReactum(Match, ReactionRule<PureBigraph>) - Method in class org.bigraphs.framework.simulation.matching.pure.PureReactiveSystem: Instantiates rule's reactum with respect to the given match.
instantiateReactumNode(Node, Node, Match) - Method in class org.bigraphs.framework.simulation.matching.pure.PureReactiveSystem: This method is called during the instantiation of rule's reactum.
instantiateReactumV2(Match, ReactionRule<PureBigraph>) - Method in class org.bigraphs.framework.simulation.matching.pure.PureReactiveSystem
instantiationMap - Variable in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
InstantiationMap - Class in org.bigraphs.framework.core.reactivesystem: An instantiation map for a parametric reaction rule.
InstantiationMapIsNotWellDefined - Exception in org.bigraphs.framework.core.exceptions
InstantiationMapIsNotWellDefined() - Constructor for exception org.bigraphs.framework.core.exceptions.InstantiationMapIsNotWellDefined
internalBigraphMetaMetaModel() - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement.Load: Loads the internal metamodel of a base bigraph that is declared in the bigraphMetaModel dependency.
internalSignatureMetaMetaModel() - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement.Load: Loads the internal metamodel of the base bigraphical signature that is declared in the bigraphMetaModel dependency.
InvalidArityOfControlException - Exception in org.bigraphs.framework.core.exceptions: Exception that is thrown with operations on controls where the arity must be considered, e.g., connecting links to a node with no free ports.
InvalidArityOfControlException() - Constructor for exception org.bigraphs.framework.core.exceptions.InvalidArityOfControlException
InvalidArityOfControlException(String) - Constructor for exception org.bigraphs.framework.core.exceptions.InvalidArityOfControlException
InvalidConnectionException - Exception in org.bigraphs.framework.core.exceptions: Base exception class for any invalid connection.
InvalidConnectionException() - Constructor for exception org.bigraphs.framework.core.exceptions.InvalidConnectionException
InvalidConnectionException(String) - Constructor for exception org.bigraphs.framework.core.exceptions.InvalidConnectionException
InvalidModelResult - Class in org.bigraphs.framework.core.validation
InvalidModelResult(Exception) - Constructor for class org.bigraphs.framework.core.validation.InvalidModelResult
InvalidModelResult(List<Exception>) - Constructor for class org.bigraphs.framework.core.validation.InvalidModelResult
InvalidOrdinalTypeException - Exception in org.bigraphs.framework.core.exceptions
InvalidOrdinalTypeException() - Constructor for exception org.bigraphs.framework.core.exceptions.InvalidOrdinalTypeException
InvalidReactionRuleException - Exception in org.bigraphs.framework.core.exceptions
InvalidReactionRuleException() - Constructor for exception org.bigraphs.framework.core.exceptions.InvalidReactionRuleException
InvalidReactionRuleException(String) - Constructor for exception org.bigraphs.framework.core.exceptions.InvalidReactionRuleException
InvalidSimulationStrategy - Exception in org.bigraphs.framework.simulation.exceptions
InvalidSimulationStrategy() - Constructor for exception org.bigraphs.framework.simulation.exceptions.InvalidSimulationStrategy
isActive() - Method in interface org.bigraphs.framework.core.Bigraph: A bigraph is active if all its sites are active.
isActive(Control) - Static method in enum class org.bigraphs.framework.core.ControlStatus
isActiveAtNode(BigraphEntity.NodeEntity<C>) - Method in interface org.bigraphs.framework.core.Bigraph
isActiveAtSite(int) - Method in interface org.bigraphs.framework.core.Bigraph: A site is active if all its ancestors are also active.
isAtomic(Control) - Static method in enum class org.bigraphs.framework.core.ControlStatus: Returns true if the control is atomic, meaning, that nothing may be nested within a node incorporating this control.
isBEdge(EObject) - Method in interface org.bigraphs.framework.core.EcoreBigraph
isBigraphElementaryLinking(Bigraph<?>) - Static method in class org.bigraphs.framework.core.utils.BigraphUtil
isBigraphElementaryPlacing(Bigraph<?>) - Static method in class org.bigraphs.framework.core.utils.BigraphUtil
isBindingControl() - Method in class org.bigraphs.framework.core.impl.signature.BindingControl
isBindingControl(BindingControl<? extends NamedType, ? extends FiniteOrdinal>) - Method in class org.bigraphs.framework.core.impl.signature.BindingSignature
isBInnerName(EObject) - Method in interface org.bigraphs.framework.core.EcoreBigraph
isBLink(EObject) - Method in interface org.bigraphs.framework.core.EcoreBigraph
isBNode(EObject) - Method in interface org.bigraphs.framework.core.EcoreBigraph
isBOuterName(EObject) - Method in interface org.bigraphs.framework.core.EcoreBigraph
isBPlace(EObject) - Method in interface org.bigraphs.framework.core.EcoreBigraph
isBPoint(EObject) - Method in interface org.bigraphs.framework.core.EcoreBigraph
isBPort(EObject) - Method in interface org.bigraphs.framework.core.EcoreBigraph
isBRoot(EObject) - Method in interface org.bigraphs.framework.core.EcoreBigraph
isBSite(EObject) - Method in interface org.bigraphs.framework.core.EcoreBigraph
isConnectedWithLink(BigraphEntity.NodeEntity<Control>, EObject) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Helper method to check if a given node is connected to the given link.
isDefined() - Method in interface org.bigraphs.framework.core.reactivesystem.HasLabel: Determines if the label is set or not.
isdirected - Variable in class GCF.DefaultImpl2.GXLRelAPIImpl
isDiscrete() - Method in interface org.bigraphs.framework.core.Bigraph: A discrete bigraph has no edges and its link map is bijective (all names are distinct and every point is open).
isEdge(BigraphEntity) - Static method in enum class org.bigraphs.framework.core.BigraphEntityType: If entity is null, then false will be returned
isEdge(EObject) - Method in class org.bigraphs.framework.core.BigraphBuilderSupport
isElementaryBigraph(Bigraph<?>) - Static method in class org.bigraphs.framework.core.utils.BigraphUtil: Basic checking method for simple elementary bigraphs such as a merge or closure.
isEmpty() - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph
isEncodingFinished() - Method in class org.bigraphs.framework.core.AbstractRankedGraph
isEncodingStarted() - Method in class org.bigraphs.framework.core.AbstractRankedGraph
isEngagedTransition() - Method in class org.bigraphs.framework.core.reactivesystem.TransitionTriple
isEpimorphic() - Method in interface org.bigraphs.framework.core.Bigraph: A concrete bigraph is epi (epimorphic) iff its place graph has no idle root (i.e., no root is a barren) and its link graph has no idle outer names.
isEquivalentTo(AST) - Method in class org.bigraphs.framework.simulation.equivalence.StrongBisimulationMixinImpl
isEquivalentTo(ReactionGraphExtended) - Method in class org.bigraphs.framework.simulation.equivalence.ReactionGraphExtended
isEquivalentTo(R) - Method in interface org.bigraphs.framework.simulation.equivalence.BehavioralEquivalenceMixin
isGround() - Method in interface org.bigraphs.framework.core.Bigraph: Checks, if the bigraph is ground, that is, whether the inner interface is empty (no sites and no inner names).
isGuarding() - Method in interface org.bigraphs.framework.core.Bigraph: Checks if the bigraph is guarding.
isIdentity() - Method in class org.bigraphs.framework.core.reactivesystem.InstantiationMap
isIndexable(EObject) - Method in interface org.bigraphs.framework.core.EcoreBigraph
isInnerName(BigraphEntity) - Static method in enum class org.bigraphs.framework.core.BigraphEntityType: If entity is null, then false will be returned
isInterfaceNode() - Method in class org.bigraphs.framework.core.AbstractRankedGraph.LabeledNode
isLeaf(Graph<ReactionGraph.LabeledNode, ReactionGraph.LabeledEdge>) - Static method in class org.bigraphs.framework.core.reactivesystem.analysis.ReactionGraphAnalysis
isLean() - Method in interface org.bigraphs.framework.core.Bigraph: A bigrap is lean if it contains no idle edges.
isLink(String) - Method in class org.bigraphs.framework.core.reactivesystem.TrackingMap
isLinking() - Method in class org.bigraphs.framework.core.ElementaryBigraph
isLinking(Bigraph<S>) - Method in class org.bigraphs.framework.core.BigraphCompositeSupport
isLinkNode() - Method in class org.bigraphs.framework.core.AbstractRankedGraph.LabeledNode: Symmetric method to AbstractRankedGraph.LabeledNode.isPlaceNode().
isLinkType(BigraphEntityType) - Static method in enum class org.bigraphs.framework.core.BigraphEntityType
isLinkType(BigraphEntity) - Static method in enum class org.bigraphs.framework.core.BigraphEntityType: A link is an edge or outer name.
isMatchValid(B, ReactionRule, BigraphMatch) - Method in class org.bigraphs.framework.core.reactivesystem.ConditionalParametricRuleDecorator
isMeasureTime() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions
isMonomorphic() - Method in interface org.bigraphs.framework.core.Bigraph: A concrete bigraph is mono (monomorphic) iff no two sites are siblings ("inner-injective") and no two inner names are siblings.
isNameable(EObject) - Method in interface org.bigraphs.framework.core.EcoreBigraph
isNegate() - Method in class org.bigraphs.framework.core.reactivesystem.ReactiveSystemPredicate
isNode(BigraphEntity) - Static method in enum class org.bigraphs.framework.core.BigraphEntityType: If entity is null, then false will be returned
isNode(EObject) - Method in class org.bigraphs.framework.core.BigraphBuilderSupport
isOfEClass(EObject, String) - Method in interface org.bigraphs.framework.core.EcoreBigraph
isOuterName(BigraphEntity) - Static method in enum class org.bigraphs.framework.core.BigraphEntityType: If entity is null, then false will be returned
isOuterName(EObject) - Method in class org.bigraphs.framework.core.BigraphBuilderSupport
isParallelRuleMatching() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions
isParametricRule() - Method in interface org.bigraphs.framework.core.reactivesystem.ReactionRule: A rule is parametric if its redex contains sites.
isParentOf(BigraphEntity<?>, BigraphEntity<?>) - Method in interface org.bigraphs.framework.core.Bigraph: A recursive function that checks, whether the given node has possibleParent as parent.
isParentOf(BigraphEntity<?>, BigraphEntity<?>) - Method in class org.bigraphs.framework.core.BigraphDelegator
isParentOf(BigraphEntity<?>, BigraphEntity<?>) - Method in class org.bigraphs.framework.core.ElementaryBigraph
isParentOf(BigraphEntity<?>, BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.pure.KindBigraph
isParentOf(BigraphEntity<?>, BigraphEntity<?>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraph
isPlaceNode() - Method in class org.bigraphs.framework.core.AbstractRankedGraph.LabeledNode
IsPlaceSortable - Interface in org.bigraphs.framework.core
isPlaceType(BigraphEntityType) - Static method in enum class org.bigraphs.framework.core.BigraphEntityType: Checks if the bigraph type is a place type.
isPlaceType(BigraphEntity) - Static method in enum class org.bigraphs.framework.core.BigraphEntityType: A place is a node, root or site.
isPlacing() - Method in class org.bigraphs.framework.core.ElementaryBigraph
isPlacing(Bigraph<S>) - Method in class org.bigraphs.framework.core.BigraphCompositeSupport
isPointType(BigraphEntityType) - Static method in enum class org.bigraphs.framework.core.BigraphEntityType
isPointType(BigraphEntity) - Static method in enum class org.bigraphs.framework.core.BigraphEntityType: A point is a port or an inner name.
isPort(BigraphEntity) - Static method in enum class org.bigraphs.framework.core.BigraphEntityType: If entity is null, then false will be returned
isPrime() - Method in interface org.bigraphs.framework.core.Bigraph: Checks, if the bigraph is prime.
isPrintNodeIdentifiers() - Method in class org.bigraphs.framework.simulation.encoding.BigraphCanonicalFormStrategy
isProperParametricRule() - Method in class org.bigraphs.framework.core.reactivesystem.ParametricReactionRule
isProperParametricRule() - Method in interface org.bigraphs.framework.core.reactivesystem.ReactionRule: Checks if a parametric reaction rule is well-defined subject to the constraints: Redex and Reactum are lean (=no idle edges) R has no idle roots R has no idle names
isReactionGraphAsDAG() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions
isRedexSimple() - Method in class org.bigraphs.framework.core.reactivesystem.ParametricReactionRule
isRedexSimple() - Method in interface org.bigraphs.framework.core.reactivesystem.ReactionRule: Checks whether the parametric redex is simple.
isReversible() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
isReversible() - Method in interface org.bigraphs.framework.core.reactivesystem.ReactionRule: A flag that indicates whether the rule can be also executed in reverse.
isRewriteOpenLinks() - Method in class org.bigraphs.framework.simulation.encoding.BigraphCanonicalForm
isRewriteOpenLinks() - Method in class org.bigraphs.framework.simulation.encoding.BigraphCanonicalFormStrategy
isRewriteOpenLinks() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.TransitionOptions
isRoot(BigraphEntity) - Static method in enum class org.bigraphs.framework.core.BigraphEntityType: If entity is null, then false will be returned
isRoot(EObject) - Method in class org.bigraphs.framework.core.BigraphBuilderSupport
isRootNode() - Method in class org.bigraphs.framework.core.AbstractRankedGraph.LabeledNode
isSameControl(BigraphEntity<?>, BigraphEntity<?>) - Method in class org.bigraphs.framework.simulation.matching.BigraphMatchingSupport: Helper method to check whether two nodes have the same control
isSimple() - Method in interface org.bigraphs.framework.core.reactivesystem.ReactiveSystem: Checks whether the bigraphical reactive system is simple.
isSite(BigraphEntity) - Static method in enum class org.bigraphs.framework.core.BigraphEntityType: If entity is null, then false will be returned
isSomeParentOfNode(BigraphEntity<?>, BigraphEntity<?>, Bigraph<?>) - Static method in class org.bigraphs.framework.core.utils.BigraphUtil
isValid() - Method in interface org.bigraphs.framework.core.validation.BModelValidationResult
isValid() - Method in class org.bigraphs.framework.core.validation.InvalidModelResult
isValid() - Method in class org.bigraphs.framework.core.validation.ValidModelResult
isVariableNode() - Method in class org.bigraphs.framework.core.AbstractRankedGraph.LabeledNode
isWithNodeIdentifiers() - Method in class org.bigraphs.framework.simulation.encoding.BigraphCanonicalForm
iterator() - Method in class org.bigraphs.framework.simulation.matching.MatchIterable

J

JLibBigBigraphDecoder - Class in org.bigraphs.framework.converter.jlibbig
JLibBigBigraphDecoder() - Constructor for class org.bigraphs.framework.converter.jlibbig.JLibBigBigraphDecoder
JLibBigBigraphEncoder - Class in org.bigraphs.framework.converter.jlibbig
JLibBigBigraphEncoder() - Constructor for class org.bigraphs.framework.converter.jlibbig.JLibBigBigraphEncoder
join() - Method in class org.bigraphs.framework.core.impl.elementary.Placings
juxtapose(Bigraph<S>) - Method in interface org.bigraphs.framework.core.BigraphComposite: Compute the tensor product of two bigraphs.
juxtapose(Bigraph<S>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphComposite
juxtapose(BigraphComposite<S>) - Method in interface org.bigraphs.framework.core.BigraphComposite: Convenient method for BigraphComposite.juxtapose(BigraphComposite).
juxtapose(BigraphComposite<S>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphComposite
juxtpositionOf(Bigraph<S>...) - Method in interface org.bigraphs.framework.core.BigraphComposite: Compute the tensor product in a row.
juxtpositionOf(Bigraph<S>...) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphComposite

K

KANELLAKIS_SMOLKA - Enum constant in enum class org.bigraphs.framework.simulation.equivalence.BehavioralEquivalenceMixin.Algorithms
kind - Variable in class GCF.DefaultImpl2.GXLAttrAPIImpl
KindBigraph - Class in org.bigraphs.framework.core.impl.pure
KindBigraph() - Constructor for class org.bigraphs.framework.core.impl.pure.KindBigraph
KindBigraphBuilder - Class in org.bigraphs.framework.core.impl.pure
KindBigraphBuilder(KindSignature) - Constructor for class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder
KindBigraphBuilder(KindSignature, String) - Constructor for class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder
KindBigraphBuilder(KindSignature, String, String) - Constructor for class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder
KindBigraphBuilder(KindSignature, EMetaModelData) - Constructor for class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder
KindBigraphBuilder(KindSignature, EPackage, String) - Constructor for class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder
KindBigraphBuilder(KindSignature, EPackage, EObject) - Constructor for class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder
KindBigraphBuilder(EObject) - Constructor for class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder
KindBigraphBuilder(EObject, String) - Constructor for class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder
KindBigraphBuilder(EObject, String, String) - Constructor for class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder
KindBigraphBuilder(EObject, EMetaModelData) - Constructor for class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder
KindBigraphBuilder(EObject, EPackage, EObject) - Constructor for class org.bigraphs.framework.core.impl.pure.KindBigraphBuilder
KindBigraphFactory - Class in org.bigraphs.framework.core.factory
kindBuilder(KindSignature) - Static method in class org.bigraphs.framework.core.factory.BigraphFactory
KindControlBuilder - Class in org.bigraphs.framework.core.impl.signature: Analog implementation to DynamicControlBuilder for controls of kind signatures.
KindControlBuilder() - Constructor for class org.bigraphs.framework.core.impl.signature.KindControlBuilder
kindFunction - Variable in class org.bigraphs.framework.core.impl.signature.DefaultDynamicSignature
kindFunction - Variable in class org.bigraphs.framework.core.impl.signature.KindSignature
KindSignature - Class in org.bigraphs.framework.core.impl.signature: Concrete implementation of a pure (dynamic) signature, where controls can be assigned a status = (active, passive), and further place-sorts can be defined for each control.
KindSignature(Set<DefaultDynamicControl>) - Constructor for class org.bigraphs.framework.core.impl.signature.KindSignature: This constructor automatically assumes as the default that all controls are active, thus, the kind function returns all available controls for the respective control.
KindSignature(Set<DefaultDynamicControl>, Collection<KindSort>) - Constructor for class org.bigraphs.framework.core.impl.signature.KindSignature: This constructor creates a kind signature with the given controls and kind sorts.
KindSignature(EObject) - Constructor for class org.bigraphs.framework.core.impl.signature.KindSignature: Create a kind signature object for the given Ecore instance model.
kindSignatureBuilder() - Static method in class org.bigraphs.framework.core.factory.BigraphFactory: After finalizing the signature builder (i.e., actually creating the signature object), it will be registered automatically by the registry of this factory.
KindSignatureBuilder - Class in org.bigraphs.framework.core.impl.signature: Builder class for kind signatures.
KindSignatureBuilder() - Constructor for class org.bigraphs.framework.core.impl.signature.KindSignatureBuilder
KindSort - Class in org.bigraphs.framework.core.impl.signature: A place-sort for a kind signature.

L

label - Variable in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
label - Variable in class org.bigraphs.framework.core.reactivesystem.ReactionGraph.LabeledEdge
label - Variable in class org.bigraphs.framework.core.reactivesystem.ReactionGraph.LabeledNode
label - Variable in class org.bigraphs.framework.core.reactivesystem.ReactiveSystemPredicate
LabeledEdge(String) - Constructor for class org.bigraphs.framework.core.AbstractRankedGraph.LabeledEdge: Constructs a labeled edge
LabeledEdge(String) - Constructor for class org.bigraphs.framework.core.reactivesystem.ReactionGraph.LabeledEdge: Constructs a labeled edge
LabeledNode(String, String) - Constructor for class org.bigraphs.framework.core.reactivesystem.ReactionGraph.LabeledNode
LabeledNode(String, BigraphEntityType) - Constructor for class org.bigraphs.framework.core.AbstractRankedGraph.LabeledNode
LabeledNode(String, BigraphEntityType, Control) - Constructor for class org.bigraphs.framework.core.AbstractRankedGraph.LabeledNode
LEFT_EDGE - Enum constant in enum class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons.NodeType: Deprecated.
leftEdge() - Method in class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons: Deprecated.
leftMergeSignatures(List<DefaultDynamicSignature>) - Static method in class org.bigraphs.framework.core.utils.BigraphUtil
LINE_SEP - Static variable in class org.bigraphs.framework.converter.bigmc.BigMcTransformator
LINE_SEP - Static variable in class org.bigraphs.framework.converter.bigrapher.BigrapherTransformator
LINE_SEP - Variable in class org.bigraphs.framework.converter.vcg.VCGTransformator
LinkComparator() - Constructor for class org.bigraphs.framework.core.BigraphCompositeSupport.LinkComparator
linkGraphIsConnectedGraph(PureBigraph) - Method in class org.bigraphs.framework.core.analysis.BigraphAnalysis: Deprecated.

This method computes whether the link graph of a bigraph is connected.
Linkings<S extends AbstractEcoreSignature<? extends Control<?,?>>> - Class in org.bigraphs.framework.core.impl.elementary: A linking is a node-free bigraph.
Linkings(SignatureBuilder) - Constructor for class org.bigraphs.framework.core.impl.elementary.Linkings
Linkings(S) - Constructor for class org.bigraphs.framework.core.impl.elementary.Linkings
Linkings(S, EMetaModelData) - Constructor for class org.bigraphs.framework.core.impl.elementary.Linkings
Linkings(S, EPackage) - Constructor for class org.bigraphs.framework.core.impl.elementary.Linkings
Linkings.Closure - Class in org.bigraphs.framework.core.impl.elementary
Linkings.Identity - Class in org.bigraphs.framework.core.impl.elementary
Linkings.IdentityEmpty - Class in org.bigraphs.framework.core.impl.elementary
Linkings.Substitution - Class in org.bigraphs.framework.core.impl.elementary
links - Variable in class org.bigraphs.framework.core.reactivesystem.TrackingMap
linkToInner(String) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy
linkToInner(BigraphEntity.InnerName) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy: Connect the previously created node to the given inner name.
linkToOuter(String) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy
linkToOuter(BigraphEntity.OuterName) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy: Connect the previously created node to the given outer name.
LinkTypeNotExistsException - Exception in org.bigraphs.framework.core.exceptions.builder
LinkTypeNotExistsException() - Constructor for exception org.bigraphs.framework.core.exceptions.builder.LinkTypeNotExistsException
LinkTypeNotExistsException(String) - Constructor for exception org.bigraphs.framework.core.exceptions.builder.LinkTypeNotExistsException
Load() - Constructor for class org.bigraphs.framework.core.BigraphFileModelManagement.Load
loadedInstanceModel - Variable in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
loadSignatureMetaModel(String) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Does not re-create control nodes of type EClass because it directly uses the bigraphical Ecore metamodel.

M

makeGround() - Method in interface org.bigraphs.framework.core.BigraphBuilder
makeGround() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder: Converts the current bigraph to a ground bigraph (i.e., no sites an no inner names).
map(int, int) - Method in class org.bigraphs.framework.core.reactivesystem.InstantiationMap
match(B, ReactionRule) - Method in class org.bigraphs.framework.simulation.matching.AbstractBigraphMatcher
match(PureBigraph, ReactionRule<PureBigraph>) - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphMatcher
MatchIterable<T extends BigraphMatch<? extends Bigraph<?>>> - Class in org.bigraphs.framework.simulation.matching: Custom iterable implementation for matches of type BigraphMatch.
MatchIterable(Iterator<T>) - Constructor for class org.bigraphs.framework.simulation.matching.MatchIterable
MatchResult(ReactionRule, BigraphMatch, B, String, int) - Constructor for class org.bigraphs.framework.simulation.modelchecking.ModelCheckingStrategySupport.MatchResult
MAXIMAL_DEGREE_ASSORTATIVE - Enum constant in enum class org.bigraphs.framework.core.alg.generators.RandomBigraphGeneratorSupport.LinkStrategy
MAXIMAL_DEGREE_DISASSORTATIVE - Enum constant in enum class org.bigraphs.framework.core.alg.generators.RandomBigraphGeneratorSupport.LinkStrategy
MemoryOperations - Class in org.bigraphs.framework.core.utils.auxiliary: Some utility methods for memory-based operations.
merge(int) - Method in class org.bigraphs.framework.core.impl.elementary.Placings
merge(Bigraph<S>) - Method in interface org.bigraphs.framework.core.BigraphComposite
merge(Bigraph<S>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphComposite
merge(BigraphComposite<S>) - Method in interface org.bigraphs.framework.core.BigraphComposite
merge(BigraphComposite<S>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphComposite
mergeSignatures(DefaultDynamicSignature, DefaultDynamicSignature) - Static method in class org.bigraphs.framework.core.utils.BigraphUtil: This method merges the two given signatures left and right.
mergeSignatures(DefaultDynamicSignature, DefaultDynamicSignature, int) - Static method in class org.bigraphs.framework.core.utils.BigraphUtil: This method merges the two given signatures left and right.
metaModel - Variable in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
MetaModelDataBuilder() - Constructor for class org.bigraphs.framework.core.datatypes.EMetaModelData.MetaModelDataBuilder
metaModelPackage - Variable in class org.bigraphs.framework.core.ElementaryBigraph
MIN_LINKING - Enum constant in enum class org.bigraphs.framework.core.alg.generators.RandomBigraphGeneratorSupport.LinkStrategy
modelChecker - Variable in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingStrategySupport
ModelCheckerExecutorServiceNotProvided - Exception in org.bigraphs.framework.simulation.exceptions
ModelCheckerExecutorServiceNotProvided() - Constructor for exception org.bigraphs.framework.simulation.exceptions.ModelCheckerExecutorServiceNotProvided
ModelCheckingOptions - Class in org.bigraphs.framework.simulation.modelchecking: This class represents the available options for the model checker BigraphModelChecker.
ModelCheckingOptions.ExportOptions - Class in org.bigraphs.framework.simulation.modelchecking: This class represents export-specific options regarding the generated artifacts when synthesizing the transition system.
ModelCheckingOptions.ExportOptions.Builder - Class in org.bigraphs.framework.simulation.modelchecking
ModelCheckingOptions.ExportOptions.Format - Enum Class in org.bigraphs.framework.simulation.modelchecking
ModelCheckingOptions.Options - Enum Class in org.bigraphs.framework.simulation.modelchecking
ModelCheckingOptions.Opts - Interface in org.bigraphs.framework.simulation.modelchecking
ModelCheckingOptions.TransitionOptions - Class in org.bigraphs.framework.simulation.modelchecking: Class that represents simulation-specific options.
ModelCheckingOptions.TransitionOptions.Builder - Class in org.bigraphs.framework.simulation.modelchecking: Default values:
allow reducible classes: false
modelCheckingStrategy - Variable in class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker
ModelCheckingStrategy>> - Interface in org.bigraphs.framework.simulation.modelchecking: Strategy pattern for implementing new model checking algorithms.
ModelCheckingStrategySupport>> - Class in org.bigraphs.framework.simulation.modelchecking: Base class for supporting model checking strategy implementations.
ModelCheckingStrategySupport(BigraphModelChecker) - Constructor for class org.bigraphs.framework.simulation.modelchecking.ModelCheckingStrategySupport
ModelCheckingStrategySupport.MatchResult>> - Class in org.bigraphs.framework.simulation.modelchecking
MutableBuilder<S extends AbstractEcoreSignature<? extends Control<?,?>>> - Class in org.bigraphs.framework.core.impl.pure: A generic mutable builder intended to be used for all bigraph types
MutableBuilder(EObject) - Constructor for class org.bigraphs.framework.core.impl.pure.MutableBuilder
MutableBuilder(EObject, EMetaModelData) - Constructor for class org.bigraphs.framework.core.impl.pure.MutableBuilder
MutableBuilder(EObject, EPackage, EObject) - Constructor for class org.bigraphs.framework.core.impl.pure.MutableBuilder
MutableBuilder(S) - Constructor for class org.bigraphs.framework.core.impl.pure.MutableBuilder
MutableBuilder(S, EMetaModelData) - Constructor for class org.bigraphs.framework.core.impl.pure.MutableBuilder
MutableBuilder(S, EPackage, EObject) - Constructor for class org.bigraphs.framework.core.impl.pure.MutableBuilder
mxReactionGraph - Class in org.bigraphs.framework.visualization: Custom implementation of mxGraph to adjust the node and edge styling.
mxReactionGraph(ReactionGraph, ReactiveSystem) - Constructor for class org.bigraphs.framework.visualization.mxReactionGraph: Constructs and draws a new mxGraph from a jGraphT graph.

N

name - Variable in class GCF.DefaultImpl2.GXLAttrAPIImpl
name - Variable in class org.bigraphs.framework.core.AbstractControl
name - Variable in class org.bigraphs.framework.core.datatypes.StringTypedName
NamedType<V> - Interface in org.bigraphs.framework.core.datatypes: Data type for an element of a name set which is used within an interface of a bigraph.
negate - Variable in class org.bigraphs.framework.core.reactivesystem.ReactiveSystemPredicate
neighborhoodHook(List<BigraphEntity<?>>, BigraphEntity<?>) - Method in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter
nesting(Bigraph<S>) - Method in interface org.bigraphs.framework.core.BigraphComposite: Nesting operation for two bigraphs.
nesting(Bigraph<S>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphComposite
nesting(BigraphComposite<S>) - Method in interface org.bigraphs.framework.core.BigraphComposite: Nesting operation for two bigraphs.
nesting(BigraphComposite<S>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphComposite
newControl() - Method in class org.bigraphs.framework.core.SignatureBuilder
newControl(String, int) - Method in class org.bigraphs.framework.core.impl.signature.DynamicSignatureBuilder
newControl(String, int) - Method in class org.bigraphs.framework.core.impl.signature.KindSignatureBuilder
newControl(NT, FO) - Method in class org.bigraphs.framework.core.SignatureBuilder
newMutableBuilder(EObject) - Static method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
newMutableBuilder(EObject, EMetaModelData) - Static method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
newMutableBuilder(EObject, EPackage) - Static method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
newMutableBuilder(S) - Static method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
newMutableBuilder(S, EMetaModelData) - Static method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
newMutableBuilder(S, EPackage) - Static method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
next() - Method in class org.bigraphs.framework.simulation.matching.pure.PureMatchIteratorImpl
NODE - Enum constant in enum class org.bigraphs.framework.core.BigraphEntityType
nodes() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy
NonConformReactionRuleInterfaces - Exception in org.bigraphs.framework.core.exceptions
NonConformReactionRuleInterfaces() - Constructor for exception org.bigraphs.framework.core.exceptions.NonConformReactionRuleInterfaces
NONE - Enum constant in enum class org.bigraphs.framework.core.alg.generators.RandomBigraphGeneratorSupport.LinkStrategy
numOfadj(BigraphEntity.NodeEntity<?>, Bigraph<?>) - Method in class org.bigraphs.framework.simulation.matching.pure.IHSFilter

O

occurrenceCounter - Variable in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingStrategySupport
of() - Static method in class org.bigraphs.framework.core.datatypes.StringTypedName: Creates a string-typed element for a name set with a random label.
of(String) - Static method in class org.bigraphs.framework.core.datatypes.StringTypedName: Creates a name set element with label passed by value argument.
ofInteger(int) - Static method in class org.bigraphs.framework.core.datatypes.FiniteOrdinal
onAllPredicateMatched(B, String) - Method in interface org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker.ReactiveSystemListener: This method is called if all available predicates of a reactive system evaluated to true for some state.
onCheckingReactionRule(ReactionRule) - Method in interface org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker.ReactiveSystemListener
onError(Exception) - Method in interface org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker.ReactiveSystemListener
onPredicateMatched(B, ReactiveSystemPredicate) - Method in interface org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker.ReactiveSystemListener: This method is called if a predicate evaluated to true for some state.
onPredicateViolated(B, ReactiveSystemPredicate, GraphPath<ReactionGraph.LabeledNode, ReactionGraph.LabeledEdge>) - Method in interface org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker.ReactiveSystemListener: Reports a violation of a predicate and supplies a counterexample trace from the initial state to the violating state.
onReactionIsNull() - Method in interface org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker.ReactiveSystemListener
onReactiveSystemFinished() - Method in interface org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker.ReactiveSystemListener
onReactiveSystemStarted() - Method in interface org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker.ReactiveSystemListener
onSubPredicateMatched(B, ReactiveSystemPredicate, B, B, B, B) - Method in interface org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker.ReactiveSystemListener: This method is called if a sub-bigraph-predicate evaluated to true for some state.
onUpdateReactionRuleApplies(B, ReactionRule, BigraphMatch) - Method in interface org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker.ReactiveSystemListener: This method is called within a running simulation (i.e., model checking operation), when the redex of a reaction rule could be matched within the host bigraph (i.e., the last active agent of the reactive system).
ops(Bigraph<S>) - Static method in class org.bigraphs.framework.core.factory.BigraphFactory
options - Variable in class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker
org.bigraph.model - package org.bigraph.model
org.bigraphs.framework.converter - package org.bigraphs.framework.converter
org.bigraphs.framework.converter.bigmc - package org.bigraphs.framework.converter.bigmc
org.bigraphs.framework.converter.bigrapher - package org.bigraphs.framework.converter.bigrapher
org.bigraphs.framework.converter.bigred - package org.bigraphs.framework.converter.bigred
org.bigraphs.framework.converter.ecore - package org.bigraphs.framework.converter.ecore
org.bigraphs.framework.converter.gcf.DefaultImpl1 - package org.bigraphs.framework.converter.gcf.DefaultImpl1
org.bigraphs.framework.converter.graphml - package org.bigraphs.framework.converter.graphml
org.bigraphs.framework.converter.jlibbig - package org.bigraphs.framework.converter.jlibbig
org.bigraphs.framework.converter.rankedgraph - package org.bigraphs.framework.converter.rankedgraph
org.bigraphs.framework.converter.vcg - package org.bigraphs.framework.converter.vcg
org.bigraphs.framework.core - package org.bigraphs.framework.core
org.bigraphs.framework.core.alg.generators - package org.bigraphs.framework.core.alg.generators
org.bigraphs.framework.core.analysis - package org.bigraphs.framework.core.analysis
org.bigraphs.framework.core.datatypes - package org.bigraphs.framework.core.datatypes
org.bigraphs.framework.core.exceptions - package org.bigraphs.framework.core.exceptions
org.bigraphs.framework.core.exceptions.builder - package org.bigraphs.framework.core.exceptions.builder
org.bigraphs.framework.core.exceptions.operations - package org.bigraphs.framework.core.exceptions.operations
org.bigraphs.framework.core.factory - package org.bigraphs.framework.core.factory
org.bigraphs.framework.core.impl - package org.bigraphs.framework.core.impl
org.bigraphs.framework.core.impl.elementary - package org.bigraphs.framework.core.impl.elementary
org.bigraphs.framework.core.impl.pure - package org.bigraphs.framework.core.impl.pure
org.bigraphs.framework.core.impl.signature - package org.bigraphs.framework.core.impl.signature
org.bigraphs.framework.core.providers - package org.bigraphs.framework.core.providers
org.bigraphs.framework.core.reactivesystem - package org.bigraphs.framework.core.reactivesystem
org.bigraphs.framework.core.reactivesystem.analysis - package org.bigraphs.framework.core.reactivesystem.analysis
org.bigraphs.framework.core.utils - package org.bigraphs.framework.core.utils
org.bigraphs.framework.core.utils.auxiliary - package org.bigraphs.framework.core.utils.auxiliary
org.bigraphs.framework.core.utils.emf - package org.bigraphs.framework.core.utils.emf
org.bigraphs.framework.core.validation - package org.bigraphs.framework.core.validation
org.bigraphs.framework.simulation.encoding - package org.bigraphs.framework.simulation.encoding
org.bigraphs.framework.simulation.encoding.hash - package org.bigraphs.framework.simulation.encoding.hash
org.bigraphs.framework.simulation.equivalence - package org.bigraphs.framework.simulation.equivalence
org.bigraphs.framework.simulation.equivalence.adapter - package org.bigraphs.framework.simulation.equivalence.adapter: This package contains adapters for external Java libraries related to analysis, transition systems, etc.
org.bigraphs.framework.simulation.exceptions - package org.bigraphs.framework.simulation.exceptions
org.bigraphs.framework.simulation.matching - package org.bigraphs.framework.simulation.matching
org.bigraphs.framework.simulation.matching.pure - package org.bigraphs.framework.simulation.matching.pure
org.bigraphs.framework.simulation.modelchecking - package org.bigraphs.framework.simulation.modelchecking
org.bigraphs.framework.simulation.modelchecking.predicates - package org.bigraphs.framework.simulation.modelchecking.predicates
org.bigraphs.framework.simulation.modelchecking.reactions - package org.bigraphs.framework.simulation.modelchecking.reactions
org.bigraphs.framework.visualization - package org.bigraphs.framework.visualization
org.bigraphs.framework.visualization.auxiliary - package org.bigraphs.framework.visualization.auxiliary
org.bigraphs.framework.visualization.supplier - package org.bigraphs.framework.visualization.supplier
OrPredicate>> - Class in org.bigraphs.framework.simulation.modelchecking.predicates: A composite predicate which concatenates all given predicates with the or operator.
OrPredicate(boolean, ReactiveSystemPredicate...) - Constructor for class org.bigraphs.framework.simulation.modelchecking.predicates.OrPredicate
OrPredicate(ReactiveSystemPredicate...) - Constructor for class org.bigraphs.framework.simulation.modelchecking.predicates.OrPredicate
OrPredicate(ReactiveSystemPredicate, ReactiveSystemPredicate) - Constructor for class org.bigraphs.framework.simulation.modelchecking.predicates.OrPredicate
OrPredicate(ReactiveSystemPredicate, ReactiveSystemPredicate, boolean) - Constructor for class org.bigraphs.framework.simulation.modelchecking.predicates.OrPredicate
OUTER_NAME - Enum constant in enum class org.bigraphs.framework.core.BigraphEntityType
OuterNameIsIdleException - Exception in org.bigraphs.framework.core.exceptions
OuterNameIsIdleException() - Constructor for exception org.bigraphs.framework.core.exceptions.OuterNameIsIdleException
OuterNameNotExistsException - Exception in org.bigraphs.framework.core.exceptions.builder
OuterNameNotExistsException() - Constructor for exception org.bigraphs.framework.core.exceptions.builder.OuterNameNotExistsException

P

parallelProduct(Bigraph<S>) - Method in interface org.bigraphs.framework.core.BigraphComposite: Compute the parallel product of two bigraphs.
parallelProduct(Bigraph<S>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphComposite
parallelProduct(BigraphComposite<S>) - Method in interface org.bigraphs.framework.core.BigraphComposite: Compute the parallel product of two bigraphs.
parallelProduct(BigraphComposite<S>) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphComposite
parallelProduct(ReactionRule<PureBigraph>, ReactionRule<PureBigraph>) - Method in class org.bigraphs.framework.core.reactivesystem.ReactionRuleComposer: This method composes two rules by using the parallel product.
parallelProductOf(Bigraph<S>...) - Method in interface org.bigraphs.framework.core.BigraphComposite: Compute the parallel product in a row.
parallelProductOf(Bigraph<S>...) - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphComposite
ParametricReactionRule>> - Class in org.bigraphs.framework.core.reactivesystem: Concrete implementation of a parametric reaction rule.
ParametricReactionRule(B, B) - Constructor for class org.bigraphs.framework.core.reactivesystem.ParametricReactionRule
ParametricReactionRule(B, B, boolean) - Constructor for class org.bigraphs.framework.core.reactivesystem.ParametricReactionRule
ParametricReactionRule(B, B, InstantiationMap) - Constructor for class org.bigraphs.framework.core.reactivesystem.ParametricReactionRule
ParametricReactionRule(B, B, InstantiationMap, boolean) - Constructor for class org.bigraphs.framework.core.reactivesystem.ParametricReactionRule
ParametricReactionRuleIsNotWellDefined - Exception in org.bigraphs.framework.core.exceptions
ParametricReactionRuleIsNotWellDefined() - Constructor for exception org.bigraphs.framework.core.exceptions.ParametricReactionRuleIsNotWellDefined
parentStack - Variable in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
parseSignature(DefaultDynamicSignature) - Static method in class org.bigraphs.framework.converter.jlibbig.JLibBigBigraphEncoder
PASSIVE - Enum constant in enum class org.bigraphs.framework.core.ControlStatus
permutation(int) - Method in class org.bigraphs.framework.core.impl.elementary.Placings: Create a bijection from sites to roots, similar to an identity place graph.
placeGraphIsConnectedGraph(PureBigraph) - Method in class org.bigraphs.framework.core.analysis.BigraphAnalysis: Deprecated.

This method determines whether the place graph of a bigraph is connected.
Placings<S extends AbstractEcoreSignature<? extends Control<?,?>>> - Class in org.bigraphs.framework.core.impl.elementary: A placing is a node-free bigraph.
Placings(SignatureBuilder) - Constructor for class org.bigraphs.framework.core.impl.elementary.Placings
Placings(S) - Constructor for class org.bigraphs.framework.core.impl.elementary.Placings
Placings(S, EMetaModelData) - Constructor for class org.bigraphs.framework.core.impl.elementary.Placings
Placings(S, EPackage) - Constructor for class org.bigraphs.framework.core.impl.elementary.Placings
Placings.Barren - Class in org.bigraphs.framework.core.impl.elementary
Placings.Identity1 - Class in org.bigraphs.framework.core.impl.elementary: Identity of a barren.
Placings.Join - Class in org.bigraphs.framework.core.impl.elementary
Placings.Merge - Class in org.bigraphs.framework.core.impl.elementary: A merge maps m sites to a single root where m > 0.
Placings.Permutation - Class in org.bigraphs.framework.core.impl.elementary: Base class of a bijective placing.
Placings.Symmetry - Class in org.bigraphs.framework.core.impl.elementary: Symmetry placings
PNG - Enum constant in enum class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions.Format
Port() - Constructor for class org.bigraphs.framework.core.impl.BigraphEntity.Port
PORT - Enum constant in enum class org.bigraphs.framework.core.BigraphEntityType
portIndexCounter - Variable in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
predicateChecker - Variable in class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker
predicateChecker - Variable in class org.bigraphs.framework.simulation.modelchecking.BreadthFirstSimulationStrategy: Deprecated.
predicateChecker - Variable in class org.bigraphs.framework.simulation.modelchecking.BreadthFirstStrategy
PredicateChecker>> - Class in org.bigraphs.framework.simulation.modelchecking.predicates: The task of the class is to evaluate a given set of predicates of class ReactiveSystemPredicate.
PredicateChecker(Collection<ReactiveSystemPredicate>) - Constructor for class org.bigraphs.framework.simulation.modelchecking.predicates.PredicateChecker
predicateMap - Variable in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem
predicateMatchedNodeStylesheet() - Static method in class org.bigraphs.framework.visualization.StyleConstants
PREFIX_BARREN - Static variable in interface org.bigraphs.framework.simulation.encoding.BigraphCanonicalFormSupport
prepareCommand(String, String) - Method in class org.bigraphs.framework.visualization.auxiliary.GraphvizProcess
prepareSystemEnvironment() - Method in class org.bigraphs.framework.visualization.SwingGraphStreamer: Sets some system properties so that the UI can be shown.
PrettyPrinter>> - Interface in org.bigraphs.framework.converter
printData(String) - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to print a CDATA-section.
printData(String) - Method in class GCF.DefaultImpl2.GXLBagAPIImpl: Method to print a CDATA-section.
printData(String) - Method in class GCF.DefaultImpl2.GXLSeqAPIImpl: Method to print a CDATA-section.
printData(String) - Method in class GCF.DefaultImpl2.GXLSetAPIImpl: Method to print a CDATA-section.
printData(String) - Method in class GCF.DefaultImpl2.GXLTupAPIImpl: Method to print a CDATA-section.
printData(String) - Method in class GCF.DefaultImpl2.GXLUntypedStandardValueContainerAPI: Method to print a CDATA-section.
printData(String) - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Method to print a CDATA-section.
printData(String) - Method in class GCF.DefaultImpl3.GXLBagAPIImpl: Method to print a CDATA-section.
printData(String) - Method in class GCF.DefaultImpl3.GXLSeqAPIImpl: Method to print a CDATA-section.
printData(String) - Method in class GCF.DefaultImpl3.GXLSetAPIImpl: Method to print a CDATA-section.
printData(String) - Method in class GCF.DefaultImpl3.GXLTupAPIImpl: Method to print a CDATA-section.
printData(String) - Method in class GCF.DefaultImpl3.GXLUntypedStandardValueContainerAPI: Method to print a CDATA-section.
printData(String) - Method in class GCF.original.GXLAttrAPIImpl: Method to print a CDATA-section.
printData(String) - Method in class GCF.original.GXLUntypedStandardValueContainerAPI: Method to print a CDATA-section.
printData(String) - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLAttrAPIImpl: Method to print a CDATA-section.
printData(String) - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLUntypedStandardValueContainerAPI: Method to print a CDATA-section.
printToString() - Method in class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder
printToString(Document) - Method in class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder
priority - Variable in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
processAfterHook(XMLEvent) - Method in interface org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport.XmlProcessorCallback
processAfterHook(XMLEvent) - Method in class org.bigraphs.framework.converter.bigred.DefaultReactionRuleXMLLoader
processEndEdge(EndElement) - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
processEndEdge(EndElement) - Method in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
processEndInnername(EndElement) - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
processEndInnername(EndElement) - Method in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
processEndNode(EndElement) - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
processEndNode(EndElement) - Method in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
processEndOutername(EndElement) - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
processEndOutername(EndElement) - Method in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
processEndPort(EndElement) - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
processEndPort(EndElement) - Method in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
processEndRoot(EndElement) - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
processEndRoot(EndElement) - Method in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
processEndSignature(EndElement) - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
processEndSignature(EndElement) - Method in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
processEndSite(EndElement) - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
processEndSite(EndElement) - Method in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
processStartEdge(StartElement) - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
processStartEdge(StartElement) - Method in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
processStartInnername(StartElement) - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
processStartInnername(StartElement) - Method in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
processStartNode(StartElement) - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
processStartNode(StartElement) - Method in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
processStartOutername(StartElement) - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
processStartOutername(StartElement) - Method in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
processStartPort(StartElement) - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
processStartPort(StartElement) - Method in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
processStartRoot(StartElement) - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
processStartRoot(StartElement) - Method in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
processStartSignature(StartElement) - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
processStartSignature(StartElement) - Method in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
processStartSite(StartElement) - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
processStartSite(StartElement) - Method in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
provide() - Method in interface org.bigraphs.framework.core.providers.ExecutorServicePoolProvider
provide() - Method in class org.bigraphs.framework.simulation.modelchecking.FixedThreadPoolExecutorProvider
provideControlSupplier(Signature<? extends Control>) - Method in class org.bigraphs.framework.core.alg.generators.RandomBigraphGeneratorSupport
PureBigraph - Class in org.bigraphs.framework.core.impl.pure: This class is an Ecore-based model implementation of a pure bigraph.
PureBigraph(BigraphBuilderSupport.InstanceParameter) - Constructor for class org.bigraphs.framework.core.impl.pure.PureBigraph
PureBigraph2GraphMLPrettyPrinter - Class in org.bigraphs.framework.converter.graphml: A pretty printer for bigraphs that need to be encoded as GraphML documents.
PureBigraph2GraphMLPrettyPrinter() - Constructor for class org.bigraphs.framework.converter.graphml.PureBigraph2GraphMLPrettyPrinter
PureBigraphAgentAdapter - Class in org.bigraphs.framework.simulation.matching.pure
PureBigraphAgentAdapter(PureBigraph) - Constructor for class org.bigraphs.framework.simulation.matching.pure.PureBigraphAgentAdapter
PureBigraphBuilder<S extends AbstractEcoreSignature<? extends Control<?,?>>> - Class in org.bigraphs.framework.core.impl.pure: A concrete implementation of BigraphBuilder for pure bigraphs.
PureBigraphBuilder(EObject) - Constructor for class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
PureBigraphBuilder(EObject, String) - Constructor for class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
PureBigraphBuilder(EObject, String, String) - Constructor for class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
PureBigraphBuilder(EObject, EMetaModelData) - Constructor for class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
PureBigraphBuilder(EObject, EPackage, EObject) - Constructor for class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
PureBigraphBuilder(S) - Constructor for class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
PureBigraphBuilder(S, String) - Constructor for class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
PureBigraphBuilder(S, String, String) - Constructor for class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
PureBigraphBuilder(S, EMetaModelData) - Constructor for class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
PureBigraphBuilder(S, EPackage, String) - Constructor for class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
PureBigraphBuilder(S, EPackage, EObject) - Constructor for class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
PureBigraphBuilder.Hierarchy - Class in org.bigraphs.framework.core.impl.pure: A bigraph consists of many node hierarchy.
PureBigraphComposite<S extends AbstractEcoreSignature<? extends Control<?,?>>> - Class in org.bigraphs.framework.core.impl.pure: Composable bigraph implementation of BigraphComposite for pure bigraphs.
PureBigraphComposite(Bigraph<S>) - Constructor for class org.bigraphs.framework.core.impl.pure.PureBigraphComposite: Constructor creates a composable bigraph from the given bigraph.
PureBigraphDecomposerImpl - Class in org.bigraphs.framework.core.analysis
PureBigraphDecomposerImpl(BigraphDecompositionStrategy<PureBigraph>) - Constructor for class org.bigraphs.framework.core.analysis.PureBigraphDecomposerImpl
PureBigraphFactory - Class in org.bigraphs.framework.core.factory
PureBigraphGenerator - Class in org.bigraphs.framework.core.alg.generators: A random generator for pure bigraphs.
PureBigraphGenerator(DefaultDynamicSignature) - Constructor for class org.bigraphs.framework.core.alg.generators.PureBigraphGenerator
PureBigraphGenerator(DefaultDynamicSignature, EPackage) - Constructor for class org.bigraphs.framework.core.alg.generators.PureBigraphGenerator
PureBigraphHash - Class in org.bigraphs.framework.simulation.encoding.hash
PureBigraphHash() - Constructor for class org.bigraphs.framework.simulation.encoding.hash.PureBigraphHash
PureBigraphMatcher - Class in org.bigraphs.framework.simulation.matching.pure: A matcher for PureBigraphs.
PureBigraphMatcher() - Constructor for class org.bigraphs.framework.simulation.matching.pure.PureBigraphMatcher
PureBigraphMatchingEngine - Class in org.bigraphs.framework.simulation.matching.pure: Matching algorithm for pure bigraphs (see PureBigraph).
PureBigraphModelChecker - Class in org.bigraphs.framework.simulation.modelchecking: An implementation of a BigraphModelChecker for model checking of BRS with pure bigraphs (see PureBigraph).
PureBigraphModelChecker(ReactiveSystem<PureBigraph>, BigraphModelChecker.SimulationStrategy.Type, ModelCheckingOptions) - Constructor for class org.bigraphs.framework.simulation.modelchecking.PureBigraphModelChecker
PureBigraphModelChecker(ReactiveSystem<PureBigraph>, BigraphModelChecker.SimulationStrategy.Type, ModelCheckingOptions, BigraphModelChecker.ReactiveSystemListener<PureBigraph>) - Constructor for class org.bigraphs.framework.simulation.modelchecking.PureBigraphModelChecker
PureBigraphModelChecker(ReactiveSystem<PureBigraph>, ModelCheckingOptions) - Constructor for class org.bigraphs.framework.simulation.modelchecking.PureBigraphModelChecker
PureBigraphParametricMatch - Class in org.bigraphs.framework.simulation.matching.pure: This class represents the result of a valid match.
PureBigraphParametricMatch(Match, PureBigraph, PureBigraph, PureBigraph, Bigraph<DefaultDynamicSignature>, PureBigraph, Collection<PureBigraph>) - Constructor for class org.bigraphs.framework.simulation.matching.pure.PureBigraphParametricMatch
PureBigraphParametricMatch(PureBigraph, PureBigraph, PureBigraph, Collection<PureBigraph>, Bigraph<DefaultDynamicSignature>, Bigraph<DefaultDynamicSignature>) - Constructor for class org.bigraphs.framework.simulation.matching.pure.PureBigraphParametricMatch: Deprecated.
PureBigraphRankedGraphEncoding - Class in org.bigraphs.framework.converter.rankedgraph
PureBigraphRankedGraphEncoding(PureBigraph) - Constructor for class org.bigraphs.framework.converter.rankedgraph.PureBigraphRankedGraphEncoding
PureBigraphRedexAdapter - Class in org.bigraphs.framework.simulation.matching.pure
PureBigraphRedexAdapter(PureBigraph) - Constructor for class org.bigraphs.framework.simulation.matching.pure.PureBigraphRedexAdapter
pureBuilder(S) - Static method in class org.bigraphs.framework.core.factory.BigraphFactory
pureBuilder(S, String) - Static method in class org.bigraphs.framework.core.factory.BigraphFactory
pureBuilder(S, EPackage) - Static method in class org.bigraphs.framework.core.factory.BigraphFactory
PureCanonicalForm - Class in org.bigraphs.framework.simulation.encoding: The concrete strategy to compute the canonical string of a pure bigraph (PureBigraph).
PureCanonicalForm(BigraphCanonicalForm) - Constructor for class org.bigraphs.framework.simulation.encoding.PureCanonicalForm
PureCanonicalForm.RewriteFunction - Class in org.bigraphs.framework.simulation.encoding
pureDiscreteIon(S, String, String...) - Static method in class org.bigraphs.framework.core.factory.BigraphFactory
PureLinkGraphConnectedComponents - Class in org.bigraphs.framework.core.analysis: This class implements the Union-Find-Algorithm to check whether a graph is connected or not.
PureLinkGraphConnectedComponents() - Constructor for class org.bigraphs.framework.core.analysis.PureLinkGraphConnectedComponents
PureLinkGraphConnectedComponents.UnionFind - Class in org.bigraphs.framework.core.analysis: Generic subclass that solves the connectedness problem of a graph.
pureLinkings(S) - Static method in class org.bigraphs.framework.core.factory.BigraphFactory
PureMatchIteratorImpl - Class in org.bigraphs.framework.simulation.matching.pure: Iterator implementation for bigraph matching.
purePlacings(S) - Static method in class org.bigraphs.framework.core.factory.BigraphFactory
pureRandomBuilder(S) - Static method in class org.bigraphs.framework.core.factory.BigraphFactory
pureRandomBuilder(S, EPackage) - Static method in class org.bigraphs.framework.core.factory.BigraphFactory
PureReactiveSystem - Class in org.bigraphs.framework.simulation.matching.pure: An implementation of an AbstractSimpleReactiveSystem providing a simple BRS data structure for pure bigraphs (see PureBigraph) and possibly later also binding bigraphs, bigraphs with sharing etc.
PureReactiveSystem() - Constructor for class org.bigraphs.framework.simulation.matching.pure.PureReactiveSystem
pureSignatureBuilder() - Static method in class org.bigraphs.framework.core.factory.BigraphFactory: After finalizing the signature builder (i.e., actually creating the signature object), it will be registered automatically by the registry of this factory.

R

RANDOM - Enum constant in enum class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker.SimulationStrategy.Type
RandomAgentMatchSupplier>> - Class in org.bigraphs.framework.simulation.modelchecking.reactions: Specific implementation of AbstractAgentMatchSupplier.
RandomAgentMatchSupplier(Collection) - Constructor for class org.bigraphs.framework.simulation.modelchecking.reactions.RandomAgentMatchSupplier
RandomAgentModelCheckingStrategy>> - Class in org.bigraphs.framework.simulation.modelchecking: Random state-space traversal without cycle-checking and predicate evaluation.
RandomAgentModelCheckingStrategy(BigraphModelChecker) - Constructor for class org.bigraphs.framework.simulation.modelchecking.RandomAgentModelCheckingStrategy
RandomBigraphGeneratorSupport - Class in org.bigraphs.framework.core.alg.generators: Generates random bigraphs.
RandomBigraphGeneratorSupport() - Constructor for class org.bigraphs.framework.core.alg.generators.RandomBigraphGeneratorSupport
RandomBigraphGeneratorSupport(RandomBigraphGeneratorSupport.LinkStrategy) - Constructor for class org.bigraphs.framework.core.alg.generators.RandomBigraphGeneratorSupport
RandomBigraphGeneratorSupport.LinkStrategy - Enum Class in org.bigraphs.framework.core.alg.generators
ReactionGraph>> - Class in org.bigraphs.framework.core.reactivesystem: This data structure represents a "reaction graph", analogous to a labeled transition system.
ReactionGraph() - Constructor for class org.bigraphs.framework.core.reactivesystem.ReactionGraph
ReactionGraph.CanonicalLabeledNode - Class in org.bigraphs.framework.core.reactivesystem
ReactionGraph.CollapsedLabeledEdge - Class in org.bigraphs.framework.core.reactivesystem
ReactionGraph.CollapsedLabeledNode - Class in org.bigraphs.framework.core.reactivesystem
ReactionGraph.DefaultLabeledNode - Class in org.bigraphs.framework.core.reactivesystem
ReactionGraph.LabeledEdge - Class in org.bigraphs.framework.core.reactivesystem
ReactionGraph.LabeledNode - Class in org.bigraphs.framework.core.reactivesystem
ReactionGraphAnalysis>> - Class in org.bigraphs.framework.core.reactivesystem.analysis: This class provides various analysis methods/operations based on labelled transition system, specifically, for the ReactionGraph class.
ReactionGraphAnalysis.StateTrace>> - Class in org.bigraphs.framework.core.reactivesystem.analysis: Object containing one path from a state v of a reaction graph to one leave of the subtree rooted at state v
reactionGraphAsDAG(boolean) - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions
ReactionGraphCollapsed>> - Class in org.bigraphs.framework.core.reactivesystem: This class represents a "collapsed", "reduced" reaction graph, possibly consolidated by a minimization algorithm (e.g., bisim minimization).
ReactionGraphCollapsed() - Constructor for class org.bigraphs.framework.core.reactivesystem.ReactionGraphCollapsed
ReactionGraphExporter>> - Class in org.bigraphs.framework.visualization: A graphics exporter for reaction graphs.
ReactionGraphExporter(ReactiveSystem) - Constructor for class org.bigraphs.framework.visualization.ReactionGraphExporter: Constructor requires the BRS that is being model checking.
ReactionGraphExtended>> - Class in org.bigraphs.framework.simulation.equivalence: This is a "wrapper" class that extends the basic reaction graph structure ReactionGraph, and contains an instance of the behavioral equivalence mixin implementation of BehavioralEquivalenceMixin.
ReactionGraphExtended(BehavioralEquivalenceMixin<ReactionGraphExtended>) - Constructor for class org.bigraphs.framework.simulation.equivalence.ReactionGraphExtended
ReactionGraphStats>> - Class in org.bigraphs.framework.core.reactivesystem
ReactionGraphStats(ReactionGraph) - Constructor for class org.bigraphs.framework.core.reactivesystem.ReactionGraphStats
ReactionRule>> - Interface in org.bigraphs.framework.core.reactivesystem: Common interface for reaction rules.
ReactionRuleComposer<R extends ReactionRule<?>> - Class in org.bigraphs.framework.core.reactivesystem
ReactionRuleComposer() - Constructor for class org.bigraphs.framework.core.reactivesystem.ReactionRuleComposer
reactionRules - Variable in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem
ReactiveSystem>> - Interface in org.bigraphs.framework.core.reactivesystem: Base interface for bigraphical reactive systems.
reactiveSystemAffili - Variable in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
ReactiveSystemException - Exception in org.bigraphs.framework.core.exceptions
ReactiveSystemException() - Constructor for exception org.bigraphs.framework.core.exceptions.ReactiveSystemException
ReactiveSystemException(String) - Constructor for exception org.bigraphs.framework.core.exceptions.ReactiveSystemException
ReactiveSystemException(String, Throwable) - Constructor for exception org.bigraphs.framework.core.exceptions.ReactiveSystemException
ReactiveSystemException(String, Throwable, boolean, boolean) - Constructor for exception org.bigraphs.framework.core.exceptions.ReactiveSystemException
ReactiveSystemException(Throwable) - Constructor for exception org.bigraphs.framework.core.exceptions.ReactiveSystemException
reactiveSystemListener - Variable in class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker
ReactiveSystemPredicate>> - Class in org.bigraphs.framework.core.reactivesystem: Predicate interface for the reaction graph.
ReactiveSystemPredicate() - Constructor for class org.bigraphs.framework.core.reactivesystem.ReactiveSystemPredicate
ReactiveSystemPrettyPrinter>,R extends ReactiveSystem> - Interface in org.bigraphs.framework.converter: A generic pretty printer interface for bigraphical reactive systems.
reactum - Variable in class org.bigraphs.framework.converter.bigred.DefaultReactionRuleXMLLoader
reactum - Variable in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
read(String) - Static method in class org.bigraphs.framework.core.reactivesystem.TrackingMap
readXml(String) - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
readXml(String) - Method in interface org.bigraphs.framework.converter.bigred.BigRedXmlLoader: Parse the a BigRed XML file: agent, reaction rule or signature
readXml(String) - Method in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
readXml(String) - Method in class org.bigraphs.framework.converter.bigred.DefaultReactionRuleXMLLoader: Parse a BigRed XML reaction rule file
readXml(String) - Method in class org.bigraphs.framework.converter.bigred.DefaultSignatureXMLLoader
readXml(String) - Method in class org.bigraphs.framework.converter.bigred.DefaultSimulationSpecXMLLoader
recreateControls() - Method in class org.bigraphs.framework.core.AbstractEcoreSignature
recreateControls() - Method in class org.bigraphs.framework.core.impl.signature.DefaultDynamicSignature
recreateControls() - Method in class org.bigraphs.framework.core.impl.signature.KindSignature
recreateSorts() - Method in class org.bigraphs.framework.core.AbstractEcoreSignature
recreateSorts() - Method in class org.bigraphs.framework.core.impl.signature.DefaultDynamicSignature
recreateSorts() - Method in class org.bigraphs.framework.core.impl.signature.KindSignature
redex - Variable in class org.bigraphs.framework.converter.bigred.DefaultReactionRuleXMLLoader
redex - Variable in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
redex - Variable in class org.bigraphs.framework.simulation.matching.AbstractBigraphMatcher
RedexIsNotSimpleException - Exception in org.bigraphs.framework.core.exceptions: Exception that indicates that a redex of a parametric reaction rule is not simple.
RedexIsNotSimpleException() - Constructor for exception org.bigraphs.framework.core.exceptions.RedexIsNotSimpleException
REFERENCE_BCONTAINEDBY - Static variable in interface org.bigraphs.framework.core.BigraphMetaModelConstants.SignaturePackage
REFERENCE_BCONTROLS - Static variable in interface org.bigraphs.framework.core.BigraphMetaModelConstants.SignaturePackage
REFERENCE_BEDGES - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
REFERENCE_BINNERNAMES - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
REFERENCE_BKINDPLACESORTS - Static variable in interface org.bigraphs.framework.core.BigraphMetaModelConstants.SignaturePackage
REFERENCE_BKINDSORTS - Static variable in interface org.bigraphs.framework.core.BigraphMetaModelConstants.SignaturePackage
REFERENCE_BNODE_ATTRIBUTES - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
REFERENCE_BNODE_ATTRIBUTES_KEY - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
REFERENCE_BNODE_ATTRIBUTES_VALUE - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
REFERENCE_BOUTERNAMES - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
REFERENCE_BPLACESORTING - Static variable in interface org.bigraphs.framework.core.BigraphMetaModelConstants.SignaturePackage
REFERENCE_BROOTS - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
REFERENCE_BSIG - Static variable in interface org.bigraphs.framework.core.BigraphMetaModelConstants.SignaturePackage
REFERENCE_CHILD - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
REFERENCE_LINK - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
REFERENCE_NODE - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
REFERENCE_PARENT - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
REFERENCE_POINT - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
REFERENCE_PORT - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
registerEcoreResourceFactories(Resource.Factory.Registry) - Static method in class org.bigraphs.framework.core.utils.emf.EMFUtils
registerPackages(EPackage.Registry, EPackage) - Static method in class org.bigraphs.framework.core.utils.emf.EMFUtils
registerXMIResourceFactories(Resource.Factory.Registry) - Static method in class org.bigraphs.framework.core.utils.emf.EMFUtils
removeState(B) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem
renderAsync(int) - Method in class org.bigraphs.framework.visualization.SwingGraphStreamer
renderAsync(String, int) - Method in class org.bigraphs.framework.visualization.SwingGraphStreamer
renderRoots(boolean) - Method in class org.bigraphs.framework.visualization.SwingGraphStreamer
renderSites(boolean) - Method in class org.bigraphs.framework.visualization.SwingGraphStreamer
reorderBigraphs(List<Bigraph>, InstantiationMap) - Static method in class org.bigraphs.framework.core.utils.BigraphUtil: Each bigraph represents a "parameter" in a list.
reset() - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder: Clears all generated intermediate results of the bigraph's current construction inside the builder.
reset() - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph
reset() - Method in class org.bigraphs.framework.simulation.matching.pure.SubHypergraphIsoSearch
resetOccurrenceCounter() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingStrategySupport
rewrite(MutableSortedMap<String, BigraphEntity.Edge>, MutableSortedMap<String, BigraphEntity.OuterName>, BigraphEntity.Link, Supplier<String>, Supplier<String>, boolean) - Method in class org.bigraphs.framework.simulation.encoding.PureCanonicalForm.RewriteFunction
RewriteFunction() - Constructor for class org.bigraphs.framework.simulation.encoding.PureCanonicalForm.RewriteFunction
rewriteOpenLinks(boolean) - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.TransitionOptions.Builder
RIGHT_EDGE - Enum constant in enum class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons.NodeType: Deprecated.
rightEdge() - Method in class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons: Deprecated.
role - Variable in class GCF.DefaultImpl2.GXLGraphAPIImpl
role - Variable in class GCF.DefaultImpl2.GXLRelendAPIImpl
ROOT - Enum constant in enum class org.bigraphs.framework.core.BigraphEntityType
rootMap - Variable in class org.bigraphs.framework.core.AbstractRankedGraph
roots - Variable in class org.bigraphs.framework.core.AbstractRankedGraph
rule - Variable in class org.bigraphs.framework.simulation.matching.AbstractBigraphMatcher

S

self() - Method in class org.bigraphs.framework.core.ControlBuilder
self() - Method in class org.bigraphs.framework.core.SignatureBuilder
setAgent(B) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem
setAttributes(Map<String, Object>) - Method in class org.bigraphs.framework.core.impl.BigraphEntity.NodeEntity
setAttributeValue(String, String) - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Method to set an attribute-value (see GXL-DTD).
setAttributeValue(String, String) - Method in class GCF.DefaultImpl2.GXLEdgeAPIImpl: Method to set an attribute-value (see GXL-DTD).
setAttributeValue(String, String) - Method in class GCF.DefaultImpl2.GXLGraphAPIImpl: Method to set an attribute-value (see GXL-DTD).
setAttributeValue(String, String) - Method in class GCF.DefaultImpl2.GXLGXLAPIImpl: Method to set an attribute-value (see GXL-DTD).
setAttributeValue(String, String) - Method in class GCF.DefaultImpl2.GXLLocatorAPIImpl: Method to set an attribute-value (see GXL-DTD).
setAttributeValue(String, String) - Method in class GCF.DefaultImpl2.GXLNodeAPIImpl: Method to set an attribute-value (see GXL-DTD).
setAttributeValue(String, String) - Method in class GCF.DefaultImpl2.GXLRelAPIImpl: Method to set an attribute-value (see GXL-DTD).
setAttributeValue(String, String) - Method in class GCF.DefaultImpl2.GXLRelendAPIImpl: Method to set an attribute-value (see GXL-DTD).
setAttributeValue(String, String) - Method in class GCF.DefaultImpl2.GXLStandardAPI: Method to set an attribute-value (see GXL-DTD).
setAttributeValue(String, String) - Method in class GCF.DefaultImpl2.GXLTypeAPIImpl: Method to set an attribute-value (see GXL-DTD).
setAttributeValue(String, String) - Method in class GCF.DefaultImpl3.GXLEdgeAPIImpl: Method to set an attribute-value (see GXL-DTD).
setAttributeValue(String, String) - Method in class GCF.DefaultImpl3.GXLGraphAPIImpl: Method to set an attribute-value (see GXL-DTD).
setAttributeValue(String, String) - Method in class GCF.DefaultImpl3.GXLGXLAPIImpl: Method to set an attribute-value (see GXL-DTD).
setAttributeValue(String, String) - Method in class GCF.DefaultImpl3.GXLLocatorAPIImpl: Method to set an attribute-value (see GXL-DTD).
setAttributeValue(String, String) - Method in class GCF.DefaultImpl3.GXLNodeAPIImpl: Method to set an attribute-value (see GXL-DTD).
setAttributeValue(String, String) - Method in class GCF.DefaultImpl3.GXLRelAPIImpl: Method to set an attribute-value (see GXL-DTD).
setAttributeValue(String, String) - Method in class GCF.DefaultImpl3.GXLRelendAPIImpl: Method to set an attribute-value (see GXL-DTD).
setAttributeValue(String, String) - Method in class GCF.DefaultImpl3.GXLStandardAPI: Method to set an attribute-value (see GXL-DTD).
setAttributeValue(String, String) - Method in class GCF.DefaultImpl3.GXLTypeAPIImpl: Method to set an attribute-value (see GXL-DTD).
setAttributeValue(String, String) - Method in class GCF.original.GXLStandardAPI: Method to set an attribute-value (see GXL-DTD).
setAttributeValue(String, String) - Method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLStandardAPI: Method to set an attribute-value (see GXL-DTD).
setCallback(BigraphXmlLoaderSupport.XmlProcessorCallback) - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
setCanonicalNodeLabel(boolean) - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph
setCanonicalStringOfResult(String) - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingStrategySupport.MatchResult
setCollapsedEdges(List<ReactionGraph.LabeledEdge>) - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph.CollapsedLabeledEdge
setCollapsedNodes(List<ReactionGraph.LabeledNode>) - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph.CollapsedLabeledNode
setContext(PureBigraph) - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphParametricMatch
setCurrentDepth(int) - Static method in class GCF.original.GXLOutputAPI: Sets the current depth of the Abstract Syntax Tree generated by the GCF.GXLConnector.
setCurrentDepth(Integer) - Static method in class GCF.DefaultImpl2.GXLOutputAPI: Sets the current depth of the Abstract Syntax Tree generated by the GCF.GXLConnector.
setCurrentDepth(Integer) - Static method in class GCF.DefaultImpl3.GXLOutputAPI: Sets the current depth of the Abstract Syntax Tree generated by the GCF.GXLConnector.
setCurrentDepth(Integer) - Static method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLOutputAPI: Sets the current depth of the Abstract Syntax Tree generated by the GCF.GXLConnector.
setDefaultBisimAlgo(BehavioralEquivalenceMixin.Algorithms) - Method in class org.bigraphs.framework.simulation.equivalence.StrongBisimulationMixinImpl
setFormatsEnabled(List<ModelCheckingOptions.ExportOptions.Format>) - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions.Builder
setFormatsEnabled(List<ModelCheckingOptions.ExportOptions.Format>) - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions
setIndex(int) - Method in class org.bigraphs.framework.core.impl.BigraphEntity.Port
setLinks(Set<String>) - Method in class org.bigraphs.framework.core.reactivesystem.TrackingMap
setLinkStrategy(RandomBigraphGeneratorSupport.LinkStrategy) - Method in class org.bigraphs.framework.core.alg.generators.PureBigraphGenerator
setLinkStrategy(RandomBigraphGeneratorSupport.LinkStrategy) - Method in class org.bigraphs.framework.core.alg.generators.RandomBigraphGeneratorSupport
setMaximumTime(long) - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.TransitionOptions.Builder
setMaximumTime(long, TimeUnit) - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.TransitionOptions.Builder
setMaximumTransitions(int) - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.TransitionOptions.Builder
setMeasureTime(boolean) - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions
setName(String) - Method in class org.bigraphs.framework.core.datatypes.EMetaModelData.MetaModelDataBuilder
setName(String) - Method in class org.bigraphs.framework.core.impl.BigraphEntity.NodeEntity
setNegate(boolean) - Method in class org.bigraphs.framework.core.reactivesystem.ReactiveSystemPredicate
setNsPrefix(String) - Method in class org.bigraphs.framework.core.datatypes.EMetaModelData.MetaModelDataBuilder
setNsUri(String) - Method in class org.bigraphs.framework.core.datatypes.EMetaModelData.MetaModelDataBuilder
setOccurrenceCount(int) - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraphStats
setOutputStatesFolder(File) - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions.Builder
setParallelRuleMatching(boolean) - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions: Instruct the simulation either to perform rule matching in parallel or sequentially (default).
setParam(PureBigraph) - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphParametricMatch
setParentOfNode(BigraphEntity<?>, BigraphEntity<?>) - Static method in class org.bigraphs.framework.core.utils.BigraphUtil
setParentOfNode(BigraphEntity, BigraphEntity) - Method in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
setParentOfNode(BigraphEntity, BigraphEntity) - Method in class org.bigraphs.framework.core.alg.generators.RandomBigraphGeneratorSupport
setParentOfNode(BigraphEntity, BigraphEntity) - Method in class org.bigraphs.framework.core.impl.pure.MutableBuilder
setParentOfNode(EObject, EObject) - Static method in class org.bigraphs.framework.core.utils.BigraphUtil
setPrintCanonicalStateLabel(boolean) - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions.Builder: Flag that can be used to determine whether the labels of the states in the reaction graph should contain the canonical form of a bigraph or not, meaning, only a constant identifier is printed suffixed with an incremented number.
setPrintNodeIdentifiers(boolean) - Method in class org.bigraphs.framework.simulation.encoding.BigraphCanonicalFormStrategy
setReactionGraphAsDAG(boolean) - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions
setReactionGraphFile(File) - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions.Builder
setReactiveSystemListener(BigraphModelChecker.ReactiveSystemListener) - Method in class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker
setRedexImage(PureBigraph) - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphParametricMatch
setRewriteOpenLinks(boolean) - Method in class org.bigraphs.framework.simulation.encoding.BigraphCanonicalForm
setRewriteOpenLinks(boolean) - Method in class org.bigraphs.framework.simulation.encoding.BigraphCanonicalFormStrategy
setRewriteResultFolder(File) - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions.Builder: Deprecated.
setRuleName(String) - Method in class org.bigraphs.framework.core.reactivesystem.TrackingMap
setWithNodeIdentifiers(boolean) - Method in class org.bigraphs.framework.simulation.encoding.BigraphCanonicalForm
sigFactory - Variable in class org.bigraphs.framework.core.impl.signature.DefaultDynamicSignature
sigFactory - Variable in class org.bigraphs.framework.core.impl.signature.KindSignature
signature - Variable in class org.bigraphs.framework.converter.bigred.DefaultBigraphXMLLoader
signature - Variable in class org.bigraphs.framework.converter.bigred.DefaultReactionRuleXMLLoader
signature - Variable in class org.bigraphs.framework.converter.bigred.DefaultSimulationSpecXMLLoader
signature - Variable in class org.bigraphs.framework.core.alg.generators.BigridGenerator: Deprecated.
signature - Variable in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
signature() - Method in class org.bigraphs.framework.core.alg.generators.BigridGenerator: Deprecated.

Get the bigrids original signature that is used to build the grid structure.
Signature<C extends Control<?,?>> - Interface in org.bigraphs.framework.core: Common interface of a bigraph's signature.
SIGNATURE_BASE_MODEL - Static variable in class org.bigraphs.framework.core.BigraphMetaModelConstants
SignatureAdapter - Class in org.bigraph.model: Adapter for our Signature class to be used with SignatureXMLSaver.
SignatureAdapter(Signature<? extends Control<StringTypedName, FiniteOrdinal<Integer>>>) - Constructor for class org.bigraph.model.SignatureAdapter
SignatureBuilder<NT extends NamedType<?>,FO extends FiniteOrdinal<?>,C extends ControlBuilder<NT,FO,C>,B extends SignatureBuilder<?,?,?,?>> - Class in org.bigraphs.framework.core: Abstract base builder class for all types of signatures.
SignatureBuilder() - Constructor for class org.bigraphs.framework.core.SignatureBuilder
signatureImplType - Variable in class org.bigraphs.framework.core.factory.AbstractBigraphFactory
signatureInstanceModel(String) - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement.Load
signatureInstanceModel(String, String) - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement.Load
signatureMetaModel(InputStream) - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement.Load
signatureMetaModel(String) - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement.Load
SignatureNotConsistentException - Exception in org.bigraphs.framework.core.exceptions
SignatureNotConsistentException() - Constructor for exception org.bigraphs.framework.core.exceptions.SignatureNotConsistentException
SignatureNotFoundException - Exception in org.bigraphs.framework.core.exceptions
SignatureNotFoundException() - Constructor for exception org.bigraphs.framework.core.exceptions.SignatureNotFoundException
SignatureValidationFailedException - Exception in org.bigraphs.framework.core.exceptions
SignatureValidationFailedException() - Constructor for exception org.bigraphs.framework.core.exceptions.SignatureValidationFailedException
SignatureValidationFailedException(String) - Constructor for exception org.bigraphs.framework.core.exceptions.SignatureValidationFailedException
SignatureValidationFailedException(Throwable) - Constructor for exception org.bigraphs.framework.core.exceptions.SignatureValidationFailedException
sigPackage - Variable in class org.bigraphs.framework.core.AbstractEcoreSignature
SIMULATION - Enum constant in enum class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker.SimulationStrategy.Type
SimulationStrategy() - Constructor for class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker.SimulationStrategy
simulationStrategyType - Variable in class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker
SITE - Enum constant in enum class org.bigraphs.framework.core.BigraphEntityType
SiteEntity() - Constructor for class org.bigraphs.framework.core.impl.BigraphEntity.SiteEntity
size - Variable in class org.bigraphs.framework.simulation.modelchecking.reactions.AbstractAgentMatchSupplier
SORT_PREFIX - Static variable in interface org.bigraphs.framework.core.BigraphMetaModelConstants.SignaturePackage
spawnNewOne() - Method in interface org.bigraphs.framework.core.BigraphBuilder: Spawns a fresh bigraph builder but with exactly the same instance of the extended bigraph metamodel and signature as before.
spawnNewOne() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder
split(List<BigraphEntity>) - Static method in class org.bigraphs.framework.core.alg.generators.RandomBigraphGeneratorSupport
startorder - Variable in class GCF.DefaultImpl2.GXLRelendAPIImpl
stateMap - Variable in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem
StateTrace(List, List<String>) - Constructor for class org.bigraphs.framework.core.reactivesystem.analysis.ReactionGraphAnalysis.StateTrace
status(ControlStatus) - Method in class org.bigraphs.framework.core.impl.signature.DynamicControlBuilder
Store() - Constructor for class org.bigraphs.framework.core.BigraphFileModelManagement.Store
StringTypedName - Class in org.bigraphs.framework.core.datatypes: Default implementation for an element of a name set.
StringTypedName() - Constructor for class org.bigraphs.framework.core.datatypes.StringTypedName
StringTypedName(String) - Constructor for class org.bigraphs.framework.core.datatypes.StringTypedName
stringValue() - Method in interface org.bigraphs.framework.core.datatypes.NamedType
stringValue() - Method in class org.bigraphs.framework.core.datatypes.StringTypedName
StrongBisimulationMixinImpl>,AST extends ReactionGraph> - Class in org.bigraphs.framework.simulation.equivalence: Mixin Infrastructure-related class.
StrongBisimulationMixinImpl() - Constructor for class org.bigraphs.framework.simulation.equivalence.StrongBisimulationMixinImpl
Stub(EcoreBigraph<S>) - Constructor for class org.bigraphs.framework.core.EcoreBigraph.Stub: Copy constructor
StyleConstants - Class in org.bigraphs.framework.visualization: Some styling constants for the reaction graph export.
StyleConstants() - Constructor for class org.bigraphs.framework.visualization.StyleConstants
SubBigraphMatchPredicate>> - Class in org.bigraphs.framework.simulation.modelchecking.predicates: Simple predicate implementation that returns true if one bigraph is contained in another (subbigraph matching problem).
SubHypergraphIsoSearch - Class in org.bigraphs.framework.simulation.matching.pure
SubHypergraphIsoSearch(Bigraph<?>, Bigraph<?>) - Constructor for class org.bigraphs.framework.simulation.matching.pure.SubHypergraphIsoSearch
SubHypergraphIsoSearch.Embedding - Class in org.bigraphs.framework.simulation.matching.pure
substitution(String, String...) - Method in class org.bigraphs.framework.core.impl.elementary.Linkings
substitution(NamedType<?>, List<NamedType<?>>) - Method in class org.bigraphs.framework.core.impl.elementary.Linkings
substitution(NamedType<?>, NamedType<?>...) - Method in class org.bigraphs.framework.core.impl.elementary.Linkings
SwingGraphStreamer - Class in org.bigraphs.framework.visualization
SwingGraphStreamer(PureBigraph) - Constructor for class org.bigraphs.framework.visualization.SwingGraphStreamer
SwingGraphStreamer(PureBigraph, boolean, boolean) - Constructor for class org.bigraphs.framework.visualization.SwingGraphStreamer
symmetry(int) - Method in class org.bigraphs.framework.core.impl.elementary.Placings
symmetry11() - Method in class org.bigraphs.framework.core.impl.elementary.Placings
synthesizeTransitionSystem() - Method in class org.bigraphs.framework.simulation.modelchecking.BreadthFirstSimulationStrategy: Deprecated.

Compute the transition system of a bigraph with all added reaction rules so far.
synthesizeTransitionSystem() - Method in class org.bigraphs.framework.simulation.modelchecking.BreadthFirstStrategy: Compute the transition system of a bigraph with all added reaction rules so far.
synthesizeTransitionSystem() - Method in interface org.bigraphs.framework.simulation.modelchecking.ModelCheckingStrategy: Entry point of the model checking strategy to implement.
synthesizeTransitionSystem() - Method in class org.bigraphs.framework.simulation.modelchecking.RandomAgentModelCheckingStrategy

T

target - Variable in class GCF.DefaultImpl2.GXLRelendAPIImpl
test(B) - Method in class org.bigraphs.framework.core.reactivesystem.ReactiveSystemPredicate: This method is responsible to test the current state of a transition system of a BRS with the predicate at hand (which is provided by the concrete subclass).
test(B) - Method in class org.bigraphs.framework.simulation.modelchecking.predicates.AndPredicate: Concatenates all given predicates with the and operator of the ReactiveSystemPredicate class and evaluates them together.
test(B) - Method in class org.bigraphs.framework.simulation.modelchecking.predicates.BigraphIsoPredicate
test(B) - Method in class org.bigraphs.framework.simulation.modelchecking.predicates.OrPredicate: Concatenates all given predicates with the or operator of the ReactiveSystemPredicate class and evaluates them together.
test(B) - Method in class org.bigraphs.framework.simulation.modelchecking.predicates.SubBigraphMatchPredicate
throwableSupplier - Variable in class org.bigraphs.framework.simulation.matching.AbstractDynamicMatchAdapter
to - Variable in class GCF.DefaultImpl2.GXLEdgeAPIImpl
toBigraph(EcoreBigraph.Stub<DefaultDynamicSignature>, DefaultDynamicSignature) - Static method in class org.bigraphs.framework.core.utils.BigraphUtil
toBigraph(EPackage, EObject, DefaultDynamicSignature) - Static method in class org.bigraphs.framework.core.utils.BigraphUtil
toBuilder() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions
toBuilder() - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.TransitionOptions
toDOT(Bigraph<?>, boolean) - Static method in class org.bigraphs.framework.visualization.BigraphGraphvizExporter
ToManyConnections - Exception in org.bigraphs.framework.core.exceptions.builder: Exception is thrown inside a builder when the node has no free ports but a connection to a link (i.e., edge or outer name) is tried to make.
ToManyConnections() - Constructor for exception org.bigraphs.framework.core.exceptions.builder.ToManyConnections
toorder - Variable in class GCF.DefaultImpl2.GXLEdgeAPIImpl
toOutputStream(B, OutputStream) - Method in interface org.bigraphs.framework.converter.BigraphPrettyPrinter
toOutputStream(OutputStream) - Method in class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder
toOutputStream(PureBigraph, OutputStream) - Method in class org.bigraphs.framework.converter.ecore.EcoreAgentConverter
toOutputStream(PureBigraph, OutputStream) - Method in class org.bigraphs.framework.converter.graphml.PureBigraph2GraphMLPrettyPrinter
toOutputStream(PureBigraph, OutputStream) - Method in class org.bigraphs.framework.converter.vcg.VCGTransformator
toOutputStream(ReactiveSystem<PureBigraph>, OutputStream) - Method in class org.bigraphs.framework.converter.bigmc.BigMcTransformator
toOutputStream(ReactiveSystem<PureBigraph>, OutputStream) - Method in class org.bigraphs.framework.converter.ecore.EcoreConverter
toOutputStream(ReactiveSystem, OutputStream) - Method in class org.bigraphs.framework.converter.bigrapher.BigrapherTransformator
toOutputStream(Document, OutputStream) - Method in class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder
toOutputStream(R, OutputStream) - Method in interface org.bigraphs.framework.converter.ReactiveSystemPrettyPrinter: Redirects the result of an encoding to an output stream.
top() - Method in interface org.bigraphs.framework.core.BigraphBuilder.NodeHierarchy: Place the cursor to the top most element of the hierarchy.
top() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy
TOP_EDGE - Enum constant in enum class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons.NodeType: Deprecated.
TOP_LEFT - Enum constant in enum class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons.NodeType: Deprecated.
TOP_RIGHT - Enum constant in enum class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons.NodeType: Deprecated.
topEdge() - Method in class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons: Deprecated.

Top edge of a bigrid
topLeft() - Method in class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons: Deprecated.

Top-left corner of a bigrid
toPNG(AbstractRankedGraph<?, ?, ?>, File) - Method in class org.bigraphs.framework.visualization.BigraphRankedGraphExporter
toPNG(Bigraph<?>, boolean, File) - Static method in class org.bigraphs.framework.visualization.BigraphGraphvizExporter
toPNG(Bigraph<?>, File) - Method in class org.bigraphs.framework.visualization.BigraphGraphvizExporter
toPNG(ReactionGraph, File) - Method in class org.bigraphs.framework.visualization.ReactionGraphExporter: Exports a reaction graph as a PNG file.
toPNG(T, File) - Method in interface org.bigraphs.framework.visualization.BigraphGraphicsExporter
topRight() - Method in class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons: Deprecated.
toStandardOutput() - Method in class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder
toStandardOutput(Document) - Method in class org.bigraphs.framework.converter.graphml.GraphMLDomBuilder
toString() - Method in class GCF.DefaultImpl2.GXLAttrAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl2.GXLBagAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl2.GXLEdgeAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl2.GXLGraphAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl2.GXLGXLAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl2.GXLLocatorAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl2.GXLNodeAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl2.GXLRelAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl2.GXLRelendAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl2.GXLSeqAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl2.GXLSetAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl2.GXLTupAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl2.GXLTypeAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl3.GXLAttrAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl3.GXLBagAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl3.GXLEdgeAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl3.GXLGraphAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl3.GXLGXLAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl3.GXLLocatorAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl3.GXLNodeAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl3.GXLRelAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl3.GXLRelendAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl3.GXLSeqAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl3.GXLSetAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl3.GXLTupAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class GCF.DefaultImpl3.GXLTypeAPIImpl: Overwrites method toString() of class Object.
toString() - Method in class org.bigraphs.framework.core.AbstractControl
toString() - Method in class org.bigraphs.framework.core.AbstractEcoreSignature
toString() - Method in class org.bigraphs.framework.core.AbstractRankedGraph.LabeledEdge
toString() - Method in class org.bigraphs.framework.core.AbstractRankedGraph.LabeledNode
toString() - Method in class org.bigraphs.framework.core.impl.BigraphEntity.Edge
toString() - Method in class org.bigraphs.framework.core.impl.BigraphEntity.InnerName
toString() - Method in class org.bigraphs.framework.core.impl.BigraphEntity.NodeEntity
toString() - Method in class org.bigraphs.framework.core.impl.BigraphEntity.OuterName
toString() - Method in class org.bigraphs.framework.core.impl.BigraphEntity.Port
toString() - Method in class org.bigraphs.framework.core.impl.BigraphEntity.RootEntity
toString() - Method in class org.bigraphs.framework.core.impl.BigraphEntity.SiteEntity
toString() - Method in class org.bigraphs.framework.core.impl.BigraphEntity
toString() - Method in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem.Transition
toString() - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph.CanonicalLabeledNode
toString() - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph.DefaultLabeledNode
toString() - Method in class org.bigraphs.framework.core.reactivesystem.ReactionGraph.LabeledEdge
toString(B) - Method in interface org.bigraphs.framework.converter.BigraphPrettyPrinter
toString(PureBigraph) - Method in class org.bigraphs.framework.converter.ecore.EcoreAgentConverter: Throws a runtime exception if the encoding fails.
toString(PureBigraph) - Method in class org.bigraphs.framework.converter.graphml.PureBigraph2GraphMLPrettyPrinter
toString(PureBigraph) - Method in class org.bigraphs.framework.converter.vcg.VCGTransformator
toString(ReactiveSystem<PureBigraph>) - Method in class org.bigraphs.framework.converter.bigmc.BigMcTransformator
toString(ReactiveSystem<PureBigraph>) - Method in class org.bigraphs.framework.converter.bigrapher.BigrapherTransformator
toString(ReactiveSystem<PureBigraph>) - Method in class org.bigraphs.framework.converter.ecore.EcoreConverter
toString(Signature) - Static method in class org.bigraphs.framework.converter.bigmc.BigMcTransformator
toString(Signature) - Static method in class org.bigraphs.framework.converter.bigrapher.BigrapherTransformator
toString(R) - Method in interface org.bigraphs.framework.converter.ReactiveSystemPrettyPrinter: Returns the result of a reactive system encoding as string.
trackingMap - Variable in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
TrackingMap - Class in org.bigraphs.framework.core.reactivesystem: Tracking map for reaction rules.
TrackingMap() - Constructor for class org.bigraphs.framework.core.reactivesystem.TrackingMap
Transition(B, B, String) - Constructor for class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem.Transition
Transition(B, B, String, List<BMatchResult<? extends Bigraph<? extends Signature<?>>>>) - Constructor for class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem.Transition
TRANSITION - Enum constant in enum class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.Options
transitionMap - Variable in class org.bigraphs.framework.core.reactivesystem.AbstractTransitionSystem
transitionOpts() - Static method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions
TransitionSystemBoundSimpleReactiveSystem(ReactionGraph, AbstractSimpleReactiveSystem) - Constructor for class org.bigraphs.framework.core.reactivesystem.AbstractSimpleReactiveSystem.TransitionSystemBoundSimpleReactiveSystem
TransitionTriple>> - Class in org.bigraphs.framework.core.reactivesystem: A transition of a labelled transition system is a triple containing the source and target and the label (i.e., the arrow itself which is a bigraph as well).
TransitionTriple(ReactiveSystem, B, B, B) - Constructor for class org.bigraphs.framework.core.reactivesystem.TransitionTriple
type - Variable in class org.bigraphs.framework.core.ControlBuilder
type - Variable in class org.bigraphs.framework.core.impl.BigraphEntity
TypeNotExistsException - Exception in org.bigraphs.framework.core.exceptions.builder
TypeNotExistsException() - Constructor for exception org.bigraphs.framework.core.exceptions.builder.TypeNotExistsException
TypeNotExistsException(String) - Constructor for exception org.bigraphs.framework.core.exceptions.builder.TypeNotExistsException

U

union(Set<Integer>) - Method in class org.bigraphs.framework.core.analysis.PureLinkGraphConnectedComponents.UnionFind: The union method finds the representative (root) of each vertex in the hyperedge, and then merges the sets containing those representatives using the standard Union-Find operations.
UnionFind(int) - Constructor for class org.bigraphs.framework.core.analysis.PureLinkGraphConnectedComponents.UnionFind
UnionFind_PureBigraphs - Enum constant in enum class org.bigraphs.framework.core.analysis.BigraphDecompositionStrategy.DecompositionStrategy
up() - Method in interface org.bigraphs.framework.core.BigraphBuilder.NodeHierarchy: Place the cursor one level up from the current position.
up() - Method in class org.bigraphs.framework.core.impl.pure.PureBigraphBuilder.Hierarchy

V

validateBKindSignature(EObject) - Static method in interface org.bigraphs.framework.core.EcoreSignature: Validate the Ecore-based kind signature instance model.
validateBSignature(EObject) - Static method in interface org.bigraphs.framework.core.EcoreSignature: Validate the Ecore-based dynamic signature instance model.
validateModel(EObject) - Static method in class org.bigraphs.framework.core.BigraphFileModelManagement
ValidatorNotFound - Class in org.bigraphs.framework.core.validation
ValidatorNotFound() - Constructor for class org.bigraphs.framework.core.validation.ValidatorNotFound
VALIDATORS - Static variable in interface org.bigraphs.framework.core.EcoreSignature: Keeps a list of validators for checking signature instance models.
ValidModelResult - Class in org.bigraphs.framework.core.validation
ValidModelResult(Class<? extends EcoreSignature>) - Constructor for class org.bigraphs.framework.core.validation.ValidModelResult
valueOf(String) - Static method in enum class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons.NodeType: Deprecated.

Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class org.bigraphs.framework.core.alg.generators.RandomBigraphGeneratorSupport.LinkStrategy: Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class org.bigraphs.framework.core.analysis.BigraphDecompositionStrategy.DecompositionStrategy: Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class org.bigraphs.framework.core.BigraphEntityType: Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class org.bigraphs.framework.core.BigraphFileModelManagement.Format: Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class org.bigraphs.framework.core.ControlStatus: Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class org.bigraphs.framework.simulation.equivalence.BehavioralEquivalenceMixin.Algorithms: Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker.SimulationStrategy.Type: Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions.Format: Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.Options: Returns the enum constant of this class with the specified name.
values() - Static method in enum class org.bigraphs.framework.core.alg.generators.BigridGenerator.DiscreteIons.NodeType: Deprecated.

Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class org.bigraphs.framework.core.alg.generators.RandomBigraphGeneratorSupport.LinkStrategy: Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class org.bigraphs.framework.core.analysis.BigraphDecompositionStrategy.DecompositionStrategy: Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class org.bigraphs.framework.core.BigraphEntityType: Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class org.bigraphs.framework.core.BigraphFileModelManagement.Format: Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class org.bigraphs.framework.core.ControlStatus: Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class org.bigraphs.framework.simulation.equivalence.BehavioralEquivalenceMixin.Algorithms: Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker.SimulationStrategy.Type: Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions.Format: Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.Options: Returns an array containing the constants of this enum class, in the order they are declared.
variableMap - Variable in class org.bigraphs.framework.core.AbstractRankedGraph
variables - Variable in class org.bigraphs.framework.core.AbstractRankedGraph
VCGTransformator - Class in org.bigraphs.framework.converter.vcg: This pretty printer class transforms pure bigraphs of type PureBigraph to the Visualization of Compiler Graphs (VCG) format.
VCGTransformator() - Constructor for class org.bigraphs.framework.converter.vcg.VCGTransformator
vertexAdded(GraphVertexChangeEvent<ReactionGraph.LabeledNode>) - Method in class org.bigraphs.framework.visualization.mxReactionGraph
vertexLabelSupplier() - Method in class org.bigraphs.framework.core.alg.generators.RandomBigraphGeneratorSupport
vertexLabelSupplier() - Method in class org.bigraphs.framework.core.analysis.PureLinkGraphConnectedComponents
vertexRemoved(GraphVertexChangeEvent<ReactionGraph.LabeledNode>) - Method in class org.bigraphs.framework.visualization.mxReactionGraph

W

wasRewritten() - Method in interface org.bigraphs.framework.core.reactivesystem.BigraphMatch
wasRewritten() - Method in class org.bigraphs.framework.simulation.matching.pure.PureBigraphParametricMatch
watch(Supplier<A>) - Method in class org.bigraphs.framework.simulation.modelchecking.BigraphModelChecker
WeakBisimulationMixinImpl - Class in org.bigraphs.framework.simulation.equivalence: This class provides the implementation of the interface BehavioralEquivalenceMixin for the bisimulation equivalence relation.
WeakBisimulationMixinImpl() - Constructor for class org.bigraphs.framework.simulation.equivalence.WeakBisimulationMixinImpl
with(BigraphEntity) - Method in class org.bigraphs.framework.visualization.GraphicalFeatureSupplier
with(BigraphEntity, char) - Method in class org.bigraphs.framework.visualization.GraphicalFeatureSupplier
with(GraphicalFeatureSupplier<?>) - Method in interface org.bigraphs.framework.visualization.BigraphGraphicsExporter
with(GraphicalFeatureSupplier<?>) - Method in class org.bigraphs.framework.visualization.BigraphGraphvizExporter
with(GraphicalFeatureSupplier<?>) - Method in class org.bigraphs.framework.visualization.BigraphRankedGraphExporter
with(GraphicalFeatureSupplier<?>) - Method in class org.bigraphs.framework.visualization.ReactionGraphExporter
withControlListBuilder(SignatureBuilder<NT, V, B, ?>) - Method in class org.bigraphs.framework.core.ControlBuilder
withExportFormat(BigraphFileModelManagement.Format) - Method in class org.bigraphs.framework.converter.ecore.EcoreAgentConverter
withInstantiationMap(InstantiationMap) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
withLabel(String) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
withLabel(String) - Method in class org.bigraphs.framework.core.reactivesystem.ReactiveSystemPredicate
withParallelRuleMatching(boolean) - Method in class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions: Instruct the simulation either to perform rule matching in parallel or sequentially (default).
withPriority(long) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
withReactiveSystem(ReactiveSystem) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
withSeparator(String) - Method in class org.bigraphs.framework.core.reactivesystem.ReactionRuleComposer: When two rules are composed, their labels are also composed.
withTrackingMap(TrackingMap) - Method in class org.bigraphs.framework.core.reactivesystem.AbstractReactionRule
write(String) - Static method in class GCF.DefaultImpl2.GXLOutputAPI: Writes a String onto the current OutputStream.
write(String) - Static method in class GCF.DefaultImpl3.GXLOutputAPI: Writes a String onto the current OutputStream.
write(String) - Static method in class GCF.original.GXLOutputAPI: Writes a String onto the current OutputStream.
write(String) - Static method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLOutputAPI: Writes a String onto the current OutputStream.
writeDynamicInstanceModel(EPackage, Collection<EObject>, OutputStream, String) - Static method in class org.bigraphs.framework.core.utils.emf.EMFUtils
writeDynamicMetaModel(EPackage, OutputStream) - Static method in class org.bigraphs.framework.core.utils.emf.EMFUtils
writeDynamicMetaModel(EPackage, String, OutputStream) - Static method in class org.bigraphs.framework.core.utils.emf.EMFUtils
writeln() - Static method in class GCF.DefaultImpl2.GXLOutputAPI: Proceeds to the next line in the output file.
writeln() - Static method in class GCF.DefaultImpl3.GXLOutputAPI: Proceeds to the next line in the output file.
writeln() - Static method in class GCF.original.GXLOutputAPI: Proceeds to the next line in the output file.
writeln() - Static method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLOutputAPI: Proceeds to the next line in the output file.
writeln(String) - Static method in class GCF.DefaultImpl2.GXLOutputAPI: Writes a String onto the current OutputStream and proceeds to the next line
writeln(String) - Static method in class GCF.DefaultImpl3.GXLOutputAPI: Writes a String onto the current OutputStream and proceeds to the next line
writeln(String) - Static method in class GCF.original.GXLOutputAPI: Writes a String onto the current OutputStream and proceeds to the next line
writeln(String) - Static method in class org.bigraphs.framework.converter.gcf.DefaultImpl1.GXLOutputAPI: Writes a String onto the current OutputStream and proceeds to the next line
writeToFile(String) - Method in class org.bigraphs.framework.visualization.auxiliary.GraphvizProcess

X

xlink_href - Variable in class GCF.DefaultImpl2.GXLLocatorAPIImpl
xlink_href - Variable in class GCF.DefaultImpl2.GXLTypeAPIImpl
xlink_type - Variable in class GCF.DefaultImpl2.GXLLocatorAPIImpl
xlink_type - Variable in class GCF.DefaultImpl2.GXLTypeAPIImpl
XMI - Enum constant in enum class org.bigraphs.framework.core.BigraphFileModelManagement.Format
XMI - Enum constant in enum class org.bigraphs.framework.simulation.modelchecking.ModelCheckingOptions.ExportOptions.Format
xmlFile - Variable in class org.bigraphs.framework.converter.bigred.BigraphXmlLoaderSupport
xmlFile - Variable in class org.bigraphs.framework.converter.bigred.DefaultSimulationSpecXMLLoader
xmlns_xlink - Variable in class GCF.DefaultImpl2.GXLGXLAPIImpl

Z

zip(Stream<T>, Stream) - Static method in class org.bigraphs.framework.core.utils.BigraphUtil

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